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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso164560
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso164560
Fistulifera solaris
3.0e-169
595.9
320
100.0
fso122470
Fistulifera solaris
4.0e-166
585.5
320
98.1
ptri12710
Phaeodactylum tricornutum
2.9e-79
297.0
212
74.5
Sro752_g197240
Seminavis robusta
8.6e-68
258.8
206
66.0
Sro752_g197220
Seminavis robusta
5.6e-67
256.1
194
69.6
Sro2907_g340020
Seminavis robusta
5.6e-51
203.0
193
53.4
sya00G02400
Synedra acus
1.2e-48
195.3
205
52.2
sya00G00850
Synedra acus
1.5e-48
194.9
195
52.8
fso125000
Fistulifera solaris
3.4e-48
193.7
200
56.0
sya00G00830
Synedra acus
4.5e-48
193.4
172
54.7
sya00G90600
Synedra acus
4.5e-48
193.4
193
51.8
sya00G250510
Synedra acus
4.5e-48
193.4
213
48.4
sya00G48640
Synedra acus
5.8e-48
193.0
195
51.8
sya00G48650
Synedra acus
9.9e-48
192.2
195
51.3
sya00G250520
Synedra acus
9.9e-48
192.2
191
50.8
sya00G48750
Synedra acus
2.9e-47
190.7
193
50.3
sya00G91260
Synedra acus
2.9e-47
190.7
205
50.7
sya00G82080
Synedra acus
4.9e-47
189.9
205
49.8
sya00G130830
Synedra acus
4.9e-47
189.9
199
51.3
ps00G10110
Pseudo-nitzschia multiseries
8.4e-47
189.1
161
57.1
fso125020
Fistulifera solaris
1.1e-46
188.7
170
60.0
sya00G168880
Synedra acus
1.1e-46
188.7
193
51.8
sya00G265590
Synedra acus
1.1e-46
188.7
195
51.3
fso56920
Fistulifera solaris
5.4e-46
186.4
170
59.4
sya00G188530
Synedra acus
5.4e-46
186.4
195
49.7
PSNMU-V1.4_AUG-EV-PASAV3_0052330
Pseudo-nitzschia multistriata
2.1e-45
184.5
175
53.7
sya00G183350
Synedra acus
6.0e-45
183.0
202
48.5
gene18540
Fragilariopsis cylindrus
1.0e-44
182.2
161
55.9
sya00G67300
Synedra acus
1.0e-44
182.2
195
47.7
fso124850
Fistulifera solaris
8.1e-42
172.6
161
56.5
sya00G234810
Synedra acus
1.4e-41
171.8
227
42.7
sya00G240240
Synedra acus
1.4e-41
171.8
195
47.7
sya00G234790
Synedra acus
2.4e-41
171.0
234
42.7
sya00G172830
Synedra acus
5.3e-41
169.9
227
42.7
fso56900
Fistulifera solaris
2.0e-40
167.9
199
52.3
sya00G202730
Synedra acus
1.0e-39
165.6
220
45.5
sya00G234730
Synedra acus
9.3e-38
159.1
195
43.6
sya00G120410
Synedra acus
2.1e-37
157.9
194
46.4
sya00G270400
Synedra acus
6.0e-37
156.4
171
47.4
sya00G48710
Synedra acus
1.8e-36
154.8
159
52.2
sya00G48910
Synedra acus
1.8e-36
154.8
159
52.2
sya00G125000
Synedra acus
1.1e-35
152.1
156
50.6
Sro397_g134480
Seminavis robusta
2.5e-35
151.0
196
45.4
sya00G00890
Synedra acus
9.6e-35
149.1
203
43.3
gene11295
Fragilariopsis cylindrus
8.2e-34
146.0
169
47.9
ptri230810
Phaeodactylum tricornutum
3.1e-33
144.1
197
43.1
sya00G270430
Synedra acus
5.3e-33
143.3
193
42.0
PSNMU-V1.4_AUG-EV-PASAV3_0039860
Pseudo-nitzschia multistriata
7.6e-32
139.4
169
47.9
gene17050
Fragilariopsis cylindrus
1.3e-31
138.7
165
44.2
sya00G230070
Synedra acus
1.7e-31
138.3
165
46.1
gene8232
Fragilariopsis cylindrus
1.1e-30
135.6
132
53.0
ps00G28660
Pseudo-nitzschia multiseries
6.1e-29
129.8
179
41.9
ps00G55810
Pseudo-nitzschia multiseries
1.0e-28
129.0
176
42.6
gene7226
Fragilariopsis cylindrus
5.1e-28
126.7
167
43.7
Ec-11_005660
Ectocarpus siliculosus
1.9e-27
124.8
162
43.8
fso163030
Fistulifera solaris
1.9e-27
124.8
256
34.4
fso140090
Fistulifera solaris
4.3e-27
123.6
187
37.4
fso129880
Fistulifera solaris
9.7e-27
122.5
177
38.4
Sro610_g175190
Seminavis robusta
1.1e-25
119.0
178
39.3
gene19259
Fragilariopsis cylindrus
1.8e-25
118.2
137
44.5
gene20036
Fragilariopsis cylindrus
5.3e-25
116.7
137
43.8
ps00G135190
Pseudo-nitzschia multiseries
6.9e-25
116.3
173
39.9
sya00G197170
Synedra acus
2.0e-24
114.8
130
47.7
PSNMU-V1.4_AUG-EV-PASAV3_0027480
Pseudo-nitzschia multistriata
4.2e-22
107.1
184
37.0
CC00G121320
Cyclotella cryptica
2.7e-21
104.4
158
37.3
tps206670
Thalassiosira pseudonana
2.7e-21
104.4
125
43.2
gene20596
Fragilariopsis cylindrus
4.6e-21
103.6
127
43.3
Naga_100003g87
Nannochloropsis gaditana
6.7e-20
99.8
187
35.3
ptri103480
Phaeodactylum tricornutum
2.5e-19
97.8
168
39.3
sya00G48670
Synedra acus
1.3e-18
95.5
76
56.6
AA0004G03570
Aureococcus anophagefferens
1.1e-17
92.4
176
34.1
Sro2197_g318650
Seminavis robusta
3.1e-17
90.9
168
32.7
fso101860
Fistulifera solaris
5.3e-17
90.1
167
35.9
fso192860
Fistulifera solaris
5.3e-17
90.1
167
35.9
gene17404
Fragilariopsis cylindrus
6.9e-17
89.7
84
57.1
gene8218
Fragilariopsis cylindrus
9.1e-17
89.4
83
56.6
Sro2137_g316050
Seminavis robusta
5.0e-15
83.6
259
29.7
ps00G180140
Pseudo-nitzschia multiseries
8.5e-15
82.8
248
29.4
tho63980
Thalassiosira oceanica
2.5e-14
81.3
114
39.5
fso43290
Fistulifera solaris
1.6e-13
78.6
201
29.9
ptri132230
Phaeodactylum tricornutum
1.6e-13
78.6
245
29.4
fso191540
Fistulifera solaris
4.7e-13
77.0
220
30.0
PSNMU-V1.4_AUG-EV-PASAV3_0047540
Pseudo-nitzschia multistriata
6.1e-13
76.6
169
33.7
gene1457
Fragilariopsis cylindrus
7.9e-13
76.3
177
32.8
ptri228630
Phaeodactylum tricornutum
5.1e-12
73.6
163
30.7
tho103280
Thalassiosira oceanica
5.1e-12
73.6
139
34.5
CC00G144190
Cyclotella cryptica
6.7e-12
73.2
170
31.8
gene16574
Fragilariopsis cylindrus
1.5e-11
72.0
172
32.0
gene19352
Fragilariopsis cylindrus
2.0e-11
71.6
151
33.1
CC00G93660
Cyclotella cryptica
2.6e-11
71.2
185
30.8
sya00G88380
Synedra acus
2.6e-11
71.2
176
29.5
ENSG00000189403
Homo sapiens
9.7e-11
69.3
149
32.9
ENSG00000029993
Homo sapiens
3.7e-10
67.4
170
30.6
ENSG00000164104
Homo sapiens
4.8e-10
67.0
146
32.2
CC00G143880
Cyclotella cryptica
8.2e-10
66.2
213
27.7
gene17974
Fragilariopsis cylindrus
2.4e-09
64.7
185
29.7
WBGene00001972
Caenorhabditis elegans
4.1e-09
63.9
195
31.8
ptri169820
Phaeodactylum tricornutum
7.0e-09
63.2
172
27.3
ps00G115260
Pseudo-nitzschia multiseries
2.0e-08
61.6
179
25.7
fso146930
Fistulifera solaris
5.9e-08
60.1
84
39.3
fso109830
Fistulifera solaris
7.7e-08
59.7
134
30.6
tho40460
Thalassiosira oceanica
7.7e-08
59.7
93
38.7
tho451040
Thalassiosira oceanica
1.3e-07
58.9
215
23.7
gene6233
Fragilariopsis cylindrus
2.9e-07
57.8
184
25.0
fso26710
Fistulifera solaris
8.5e-07
56.2
92
34.8
Pp3c11_8530
Physcomitrella patens
4.2e-06
53.9
225
24.9
tps213090
Thalassiosira pseudonana
5.5e-06
53.5
83
37.3
ENSG00000171056
Homo sapiens
7.2e-06
53.1
115
33.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (6 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (6 genes)
Fistulifera solaris (17 genes)
Fragilariopsis cylindrus (15 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (7 genes)
Synedra acus (34 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing