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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso160310
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso160310
Fistulifera solaris
1.9e-191
669.8
367
100.0
fso77080
Fistulifera solaris
1.2e-187
657.1
367
92.1
fso77050
Fistulifera solaris
3.3e-148
526.2
320
76.6
fso191720
Fistulifera solaris
7.4e-148
525.0
320
76.6
ptri130290
Phaeodactylum tricornutum
1.3e-144
514.2
310
73.9
Sro968_g226070
Seminavis robusta
1.8e-141
503.8
292
75.3
sya00G161050
Synedra acus
2.6e-137
490.0
289
75.1
gene16313
Fragilariopsis cylindrus
6.7e-133
475.3
289
74.4
ps00G33510
Pseudo-nitzschia multiseries
7.4e-132
471.9
270
78.5
Sro99_g050950
Seminavis robusta
7.0e-130
465.3
272
74.3
tps130000
Thalassiosira pseudonana
3.5e-105
383.3
246
68.3
tho217020
Thalassiosira oceanica
2.2e-99
364.0
320
53.1
tps142420
Thalassiosira pseudonana
1.1e-79
298.5
240
52.9
tps193950
Thalassiosira pseudonana
9.6e-79
295.4
240
53.3
fso199510
Fistulifera solaris
8.1e-78
292.4
307
45.0
ptri69840
Phaeodactylum tricornutum
1.2e-76
288.5
337
40.7
sya00G196410
Synedra acus
3.4e-76
287.0
281
45.9
fso73640
Fistulifera solaris
5.8e-76
286.2
336
41.4
ptri72160
Phaeodactylum tricornutum
7.6e-76
285.8
357
40.3
Sro70_g039030
Seminavis robusta
2.2e-75
284.3
378
37.3
CC00G149660
Cyclotella cryptica
1.4e-74
281.6
309
42.7
fso43770
Fistulifera solaris
1.2e-73
278.5
372
38.2
ps00G65070
Pseudo-nitzschia multiseries
1.2e-73
278.5
288
44.8
fso64760
Fistulifera solaris
2.7e-73
277.3
372
38.2
gene18213
Fragilariopsis cylindrus
2.5e-71
270.8
282
42.6
Sro695_g188680
Seminavis robusta
2.9e-67
257.3
258
46.5
CC00G122160
Cyclotella cryptica
3.8e-67
256.9
314
41.4
CC00G69060
Cyclotella cryptica
4.3e-55
216.9
181
54.7
sya00G00440
Synedra acus
2.9e-51
204.1
186
48.4
ENSG00000163743
Homo sapiens
6.3e-46
186.4
226
35.8
FBgn0031816
Drosophila melanogaster
3.8e-43
177.2
240
36.2
Naga_100090g9
Nannochloropsis gaditana
5.1e-40
166.8
247
36.4
sya00G162130
Synedra acus
2.5e-39
164.5
253
35.2
fso155640
Fistulifera solaris
2.2e-38
161.4
265
34.3
CM13G01410
Cyanidioschyzon merolae
3.7e-38
160.6
245
35.9
Cre05.g248550
Chlamydomonas reinhardtii
6.3e-38
159.8
242
34.7
Cre17.g718300
Chlamydomonas reinhardtii
9.0e-37
156.0
245
35.5
AT1G74770
Arabidopsis thaliana
5.9e-36
153.3
242
34.3
AT3G18290
Arabidopsis thaliana
5.9e-36
153.3
322
30.7
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
7.7e-36
152.9
103
67.0
CC00G86210
Cyclotella cryptica
1.0e-35
152.5
278
32.4
AT3G62970
Arabidopsis thaliana
2.9e-35
151.0
243
35.0
Sro9_g007140
Seminavis robusta
6.5e-35
149.8
141
46.1
Pp3c10_4820
Physcomitrella patens
4.2e-34
147.1
252
33.3
AT1G18910
Arabidopsis thaliana
7.2e-34
146.4
304
28.9
Pp3c11_6970
Physcomitrella patens
4.6e-33
143.7
271
33.6
tho328140
Thalassiosira oceanica
4.6e-33
143.7
207
36.7
ps00G05920
Pseudo-nitzschia multiseries
1.8e-32
141.7
250
32.8
Pp3c14_5600
Physcomitrella patens
2.3e-32
141.4
252
31.3
SPAC2F3.16
Schizosaccharomyces pombe
2.3e-32
141.4
245
31.0
ccr36960
Chondrus crispus
3.3e-31
137.5
278
30.2
Pp3c6_1960
Physcomitrella patens
2.2e-30
134.8
307
28.3
Ec-26_004520
Ectocarpus siliculosus
2.8e-30
134.4
265
29.8
ccr161060
Chondrus crispus
3.7e-30
134.0
324
27.8
AT5G22920
Arabidopsis thaliana
4.8e-30
133.7
245
31.4
Pp3c25_14501
Physcomitrella patens
4.8e-30
133.7
307
28.0
Pp3c25_14500
Physcomitrella patens
4.8e-30
133.7
307
28.0
tps146910
Thalassiosira pseudonana
1.4e-29
132.1
226
33.6
fso150310
Fistulifera solaris
2.4e-29
131.3
203
34.0
gsu76240
Galdieria sulphuraria
9.1e-29
129.4
246
30.5
AT5G18650
Arabidopsis thaliana
7.7e-28
126.3
244
29.1
pte243060
Paramecium tetraurelia
1.0e-27
125.9
247
32.0
Pp3c2_31820
Physcomitrella patens
1.3e-27
125.6
245
31.4
AT5G25560
Arabidopsis thaliana
2.9e-27
124.4
206
34.5
Pp3c1_6070
Physcomitrella patens
6.5e-27
123.2
245
30.6
tho87860
Thalassiosira oceanica
3.6e-25
117.5
250
30.4
pte443830
Paramecium tetraurelia
1.1e-23
112.5
246
30.1
pte760660
Paramecium tetraurelia
4.8e-22
107.1
246
29.3
gene11141
Fragilariopsis cylindrus
7.7e-20
99.8
197
29.4
Sro345_g122370
Seminavis robusta
1.0e-08
62.8
119
29.4
Sro9_g007130
Seminavis robusta
1.0e-08
62.8
53
50.9
ccr143140
Chondrus crispus
1.5e-07
58.9
205
23.4
CC00G85450
Cyclotella cryptica
1.5e-07
58.9
57
47.4
SPBC17D11.02c
Schizosaccharomyces pombe
4.8e-06
53.9
86
32.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (7 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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