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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso159780
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso159780
Fistulifera solaris
0.0e+00
1374.8
728
100.0
fso36250
Fistulifera solaris
0.0e+00
1334.7
728
96.8
ptri17750
Phaeodactylum tricornutum
3.9e-249
862.4
730
63.2
ps00G191350
Pseudo-nitzschia multiseries
7.4e-216
751.9
785
55.2
Sro772_g200310
Seminavis robusta
2.2e-215
750.4
757
55.1
gene18224
Fragilariopsis cylindrus
1.0e-209
731.5
753
57.1
PSNMU-V1.4_AUG-EV-PASAV3_0076730
Pseudo-nitzschia multistriata
1.4e-209
731.1
866
47.5
sya00G137410
Synedra acus
2.3e-177
624.0
701
49.4
CC00G01240
Cyclotella cryptica
7.0e-158
559.3
846
40.8
tps45670
Thalassiosira pseudonana
4.4e-152
540.0
818
42.7
tho08960
Thalassiosira oceanica
9.0e-121
436.0
598
42.0
CC00G97220
Cyclotella cryptica
3.6e-53
211.5
455
32.7
tps174730
Thalassiosira pseudonana
6.8e-36
154.1
374
33.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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