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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso141100
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso141100
Fistulifera solaris
0.0e+00
3840.4
1962
100.0
fso173980
Fistulifera solaris
0.0e+00
3542.3
1962
92.3
ptri13370
Phaeodactylum tricornutum
0.0e+00
1789.2
2237
47.2
sya00G217340
Synedra acus
0.0e+00
1694.5
2041
47.4
Sro443_g144000
Seminavis robusta
0.0e+00
1592.4
2113
46.9
CC00G194270
Cyclotella cryptica
0.0e+00
1430.6
2147
42.8
ps00G16990
Pseudo-nitzschia multiseries
0.0e+00
1161.7
1063
57.6
gene530
Fragilariopsis cylindrus
0.0e+00
1077.8
947
58.8
tho175940
Thalassiosira oceanica
2.7e-305
1050.4
1737
40.7
tps28070
Thalassiosira pseudonana
1.4e-280
968.4
870
57.9
AT1G67500
Arabidopsis thaliana
1.9e-112
409.8
938
32.2
Pp3c2_33440
Physcomitrella patens
1.3e-110
403.7
995
31.9
ENSG00000009413
Homo sapiens
3.9e-110
402.1
976
31.2
tho346140
Thalassiosira oceanica
4.6e-103
378.6
333
55.0
Ec-12_001530
Ectocarpus siliculosus
4.4e-98
362.1
1126
28.1
FBgn0002891
Drosophila melanogaster
9.9e-98
360.9
880
30.5
Cre09.g387400
Chlamydomonas reinhardtii
1.7e-97
360.1
854
32.3
ccr21960
Chondrus crispus
2.5e-93
346.3
839
30.6
PSNMU-V1.4_AUG-EV-PASAV3_0026080
Pseudo-nitzschia multistriata
2.1e-92
343.2
552
39.5
CM18G01020
Cyanidioschyzon merolae
9.0e-91
337.8
1074
27.8
SPAC688.10
Schizosaccharomyces pombe
1.0e-86
324.3
688
32.7
gsu92350
Galdieria sulphuraria
2.1e-84
316.6
960
27.0
YPL167C
Saccharomyces cerevisiae strain S288C
1.3e-81
307.4
793
30.5
pte232000
Paramecium tetraurelia
1.0e-73
281.2
746
31.0
WBGene00021344
Caenorhabditis elegans
4.9e-73
278.9
733
30.4
emh350960
Emiliania huxleyi
2.4e-51
206.8
398
36.7
emh185860
Emiliania huxleyi
1.2e-50
204.5
398
36.2
AA0005G01720
Aureococcus anophagefferens
6.3e-44
182.2
599
28.0
fso144230
Fistulifera solaris
4.1e-43
179.5
441
30.2
Ec-10_001440
Ectocarpus siliculosus
7.0e-43
178.7
718
25.2
SPBC336.04
Schizosaccharomyces pombe
9.1e-43
178.3
554
27.1
gene6212
Fragilariopsis cylindrus
1.2e-42
177.9
544
27.6
Naga_100229g7
Nannochloropsis gaditana
1.0e-41
174.9
449
29.6
CC00G177910
Cyclotella cryptica
3.8e-41
172.9
529
27.8
ps00G51020
Pseudo-nitzschia multiseries
3.8e-41
172.9
458
29.5
CM14G01990
Cyanidioschyzon merolae
6.5e-41
172.2
596
26.2
gene17542
Fragilariopsis cylindrus
6.5e-41
172.2
555
27.2
PSNMU-V1.4_AUG-EV-PASAV3_0048050
Pseudo-nitzschia multistriata
6.5e-41
172.2
533
27.8
Sro278_g106640
Seminavis robusta
6.5e-41
172.2
454
28.9
FBgn0263600
Drosophila melanogaster
8.5e-41
171.8
449
28.7
tps169130
Thalassiosira pseudonana
1.1e-40
171.4
519
28.5
Cre01.g015250
Chlamydomonas reinhardtii
1.9e-40
170.6
600
25.3
ptri98820
Phaeodactylum tricornutum
1.2e-39
167.9
529
27.4
ccr136780
Chondrus crispus
1.6e-39
167.5
434
29.0
ENSG00000062822
Homo sapiens
2.7e-39
166.8
742
25.1
Pp3c27_3350
Physcomitrella patens
1.4e-38
164.5
631
24.9
Pp3c6_19160
Physcomitrella patens
6.7e-38
162.2
739
23.5
WBGene00008645
Caenorhabditis elegans
8.8e-38
161.8
600
25.0
sya00G178640
Synedra acus
8.8e-38
161.8
441
28.3
AT5G63960
Arabidopsis thaliana
1.7e-36
157.5
561
24.8
gsu82940
Galdieria sulphuraria
2.2e-36
157.1
452
27.0
pte563840
Paramecium tetraurelia
5.9e-34
149.1
566
23.3
fso59390
Fistulifera solaris
1.3e-33
147.9
442
26.9
YDL102W
Saccharomyces cerevisiae strain S288C
2.2e-33
147.1
426
27.5
Naga_100025g11
Nannochloropsis gaditana
4.0e-30
136.3
581
26.0
AA0002G05090
Aureococcus anophagefferens
1.8e-27
127.5
195
43.1
Pp3c17_18800
Physcomitrella patens
1.2e-26
124.8
416
25.0
Cre04.g214350
Chlamydomonas reinhardtii
2.0e-21
107.5
395
27.3
SPAC3H5.06c
Schizosaccharomyces pombe
5.7e-21
105.9
440
24.3
tho135840
Thalassiosira oceanica
5.7e-21
105.9
257
30.4
tps230140
Thalassiosira pseudonana
2.8e-20
103.6
352
26.1
ccr140240
Chondrus crispus
1.4e-19
101.3
323
27.6
ENSG00000101868
Homo sapiens
4.1e-19
99.8
448
23.4
gsu98870
Galdieria sulphuraria
5.4e-19
99.4
457
25.6
ptri241570
Phaeodactylum tricornutum
7.8e-18
95.5
459
23.7
WBGene00012936
Caenorhabditis elegans
2.3e-17
94.0
440
25.2
Ec-06_005880
Ectocarpus siliculosus
2.9e-17
93.6
413
24.9
emh151600
Emiliania huxleyi
5.0e-17
92.8
255
27.5
sya00G263590
Synedra acus
5.0e-17
92.8
363
24.8
CM09G01760
Cyanidioschyzon merolae
6.6e-17
92.4
477
24.5
emh323040
Emiliania huxleyi
1.9e-16
90.9
215
29.3
fso88210
Fistulifera solaris
1.9e-16
90.9
351
26.2
PSNMU-V1.4_AUG-EV-PASAV3_0055930
Pseudo-nitzschia multistriata
1.9e-16
90.9
366
24.6
ps00G116560
Pseudo-nitzschia multiseries
2.5e-16
90.5
353
24.9
AA0021G01210
Aureococcus anophagefferens
4.3e-16
89.7
444
23.6
fso83820
Fistulifera solaris
4.3e-16
89.7
351
25.9
Sro49_g028720
Seminavis robusta
1.2e-15
88.2
438
23.7
tho331580
Thalassiosira oceanica
1.2e-15
88.2
353
24.9
FBgn0259113
Drosophila melanogaster
3.6e-15
86.7
403
24.8
gene15488
Fragilariopsis cylindrus
1.8e-14
84.3
353
25.5
AA0001G00210
Aureococcus anophagefferens
4.0e-14
83.2
293
27.0
pte511280
Paramecium tetraurelia
1.5e-13
81.3
489
21.5
CC00G204380
Cyclotella cryptica
2.6e-13
80.5
274
25.9
emh272570
Emiliania huxleyi
9.8e-13
78.6
440
24.3
tho229920
Thalassiosira oceanica
3.7e-12
76.6
353
23.5
Cre03.g198750
Chlamydomonas reinhardtii
4.9e-12
76.3
380
22.9
Pp3c25_2990
Physcomitrella patens
4.9e-12
76.3
424
23.8
Pp3c16_6050
Physcomitrella patens
6.4e-12
75.9
423
23.6
pte412380
Paramecium tetraurelia
3.0e-09
67.0
138
28.3
tho135860
Thalassiosira oceanica
5.0e-09
66.2
186
28.0
AA0002G05100
Aureococcus anophagefferens
2.1e-07
60.8
58
53.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (6 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing