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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso140160
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso140160
Fistulifera solaris
0.0e+00
1573.9
752
100.0
fso129820
Fistulifera solaris
0.0e+00
1513.8
752
94.9
fso42660
Fistulifera solaris
7.0e-286
984.6
546
83.2
fso147750
Fistulifera solaris
2.8e-242
839.7
629
60.6
tho137940
Thalassiosira oceanica
2.6e-139
497.7
726
37.5
gene12135
Fragilariopsis cylindrus
1.9e-89
332.0
763
29.4
ps00G07090
Pseudo-nitzschia multiseries
1.7e-85
318.9
758
29.0
PSNMU-V1.4_AUG-EV-PASAV3_0030520
Pseudo-nitzschia multistriata
1.1e-84
316.2
772
29.4
gene21045
Fragilariopsis cylindrus
7.7e-75
283.5
733
28.1
ps00G67530
Pseudo-nitzschia multiseries
2.2e-37
159.1
224
37.5
gene10382
Fragilariopsis cylindrus
5.2e-31
137.9
231
34.6
ps00G178770
Pseudo-nitzschia multiseries
4.7e-24
114.8
383
24.8
emh636280
Emiliania huxleyi
8.4e-13
77.4
236
28.8
emh136320
Emiliania huxleyi
1.3e-10
70.1
219
29.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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