Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso140140
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso140140
Fistulifera solaris
0.0e+00
1713.7
831
100.0
fso129830
Fistulifera solaris
0.0e+00
1515.0
832
87.9
Sro1843_g301180
Seminavis robusta
3.7e-46
188.3
341
33.1
Sro202_g085470
Seminavis robusta
1.6e-41
172.9
364
32.1
Sro218_g090170
Seminavis robusta
2.8e-41
172.2
334
31.7
tps222350
Thalassiosira pseudonana
1.0e-40
170.2
328
31.1
Sro1843_g301190
Seminavis robusta
2.0e-39
166.0
336
31.0
Sro158_g071500
Seminavis robusta
1.9e-37
159.5
311
34.1
tho376700
Thalassiosira oceanica
5.0e-35
151.4
383
29.8
tps232400
Thalassiosira pseudonana
1.9e-34
149.4
388
27.8
tps69300
Thalassiosira pseudonana
1.1e-29
133.7
236
33.1
Sro3_g001980
Seminavis robusta
1.4e-29
133.3
395
26.1
tho68000
Thalassiosira oceanica
1.2e-28
130.2
338
30.8
tps234210
Thalassiosira pseudonana
9.9e-23
110.5
331
27.2
tps232920
Thalassiosira pseudonana
2.8e-17
92.4
331
24.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (6 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing