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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso136470
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso136470
Fistulifera solaris
0.0e+00
2008.4
1077
100.0
fso33200
Fistulifera solaris
0.0e+00
1867.8
1079
92.8
ptri228950
Phaeodactylum tricornutum
0.0e+00
1085.9
1134
53.4
PSNMU-V1.4_AUG-EV-PASAV3_0081460
Pseudo-nitzschia multistriata
3.9e-298
1025.8
1171
49.5
ps00G192280
Pseudo-nitzschia multiseries
1.8e-287
990.3
1142
49.0
Sro750_g197030
Seminavis robusta
1.3e-285
984.2
1117
48.3
sya00G32010
Synedra acus
8.3e-256
885.2
1157
45.2
gene16973
Fragilariopsis cylindrus
4.4e-241
836.3
777
57.8
tps04010
Thalassiosira pseudonana
2.5e-183
644.4
866
46.3
CC00G99480
Cyclotella cryptica
2.2e-176
621.3
868
44.6
Ec-20_004140
Ectocarpus siliculosus
2.2e-54
216.1
833
25.5
tho344440
Thalassiosira oceanica
5.9e-44
181.4
282
40.1
AT2G05170
Arabidopsis thaliana
1.8e-37
159.8
730
24.7
ENSG00000160695
Homo sapiens
2.9e-35
152.5
741
23.6
ENSG00000280616
Homo sapiens
2.9e-35
152.5
741
23.6
Pp3c25_5560
Physcomitrella patens
1.4e-21
107.1
381
26.8
Cre02.g095074
Chlamydomonas reinhardtii
3.3e-18
95.9
138
37.0
WBGene00011067
Caenorhabditis elegans
1.4e-13
80.5
275
28.0
SPAC823.12
Schizosaccharomyces pombe
2.7e-12
76.3
222
28.4
pte663880
Paramecium tetraurelia
8.6e-11
71.2
117
32.5
pte754300
Paramecium tetraurelia
8.6e-11
71.2
117
32.5
FBgn0052350
Drosophila melanogaster
4.3e-10
68.9
251
23.5
gsu85630
Galdieria sulphuraria
2.9e-06
56.2
178
27.0
YMR231W
Saccharomyces cerevisiae strain S288C
3.7e-06
55.8
310
20.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing