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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso132970
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso132970
Fistulifera solaris
1.6e-308
1059.3
524
100.0
fso13780
Fistulifera solaris
2.8e-289
995.3
536
91.4
CC00G176020
Cyclotella cryptica
3.7e-225
782.3
533
70.9
tho127860
Thalassiosira oceanica
7.9e-220
764.6
532
70.1
tps140990
Thalassiosira pseudonana
6.6e-150
532.3
379
69.9
Sro340_g121190
Seminavis robusta
1.2e-127
458.4
576
44.6
AA0006G04030
Aureococcus anophagefferens
5.7e-69
263.5
512
35.5
gsu123150
Galdieria sulphuraria
5.0e-65
250.4
498
35.5
Pp3c1_35170
Physcomitrella patens
1.5e-64
248.8
505
35.2
ptri52210
Phaeodactylum tricornutum
1.9e-64
248.4
507
33.5
ps00G10380
Pseudo-nitzschia multiseries
7.3e-64
246.5
513
34.3
gene15177
Fragilariopsis cylindrus
3.6e-63
244.2
513
33.7
fso173340
Fistulifera solaris
3.6e-63
244.2
499
33.5
fso183330
Fistulifera solaris
3.6e-63
244.2
499
33.5
tho150540
Thalassiosira oceanica
1.8e-62
241.9
516
33.3
Naga_100026g49
Nannochloropsis gaditana
2.3e-62
241.5
515
33.8
gene20945
Fragilariopsis cylindrus
3.1e-62
241.1
519
32.0
gene10186
Fragilariopsis cylindrus
3.1e-62
241.1
519
32.0
Sro791_g202920
Seminavis robusta
5.2e-62
240.4
533
33.2
ENSG00000137513
Homo sapiens
2.6e-61
238.0
502
33.5
sya00G100340
Synedra acus
4.4e-61
237.3
504
32.7
Naga_100047g21
Nannochloropsis gaditana
5.8e-61
236.9
513
32.4
tps130380
Thalassiosira pseudonana
7.5e-61
236.5
516
32.8
AT4G17300
Arabidopsis thaliana
1.7e-60
235.3
504
31.9
pte354190
Paramecium tetraurelia
6.4e-60
233.4
499
33.7
Ec-17_000510
Ectocarpus siliculosus
4.1e-59
230.7
532
31.4
emh359520
Emiliania huxleyi
5.4e-59
230.3
561
31.9
emh232420
Emiliania huxleyi
5.4e-59
230.3
561
31.9
ps00G108750
Pseudo-nitzschia multiseries
5.4e-59
230.3
549
30.4
CM18G02050
Cyanidioschyzon merolae
7.0e-59
229.9
499
33.1
pte438960
Paramecium tetraurelia
4.6e-58
227.3
499
32.7
PSNMU-V1.4_AUG-EV-PASAV3_0059610
Pseudo-nitzschia multistriata
1.3e-57
225.7
574
30.1
ccr94680
Chondrus crispus
1.7e-57
225.3
513
32.2
sya00G173520
Synedra acus
8.6e-57
223.0
550
30.2
pte518820
Paramecium tetraurelia
9.5e-56
219.5
503
31.4
Pp3c12_7710
Physcomitrella patens
3.6e-55
217.6
576
29.5
Ec-16_001810
Ectocarpus siliculosus
4.7e-55
217.2
510
33.9
Pp3c12_7760
Physcomitrella patens
6.2e-55
216.9
576
29.3
AT1G70980
Arabidopsis thaliana
4.0e-54
214.2
578
28.4
AT5G56680
Arabidopsis thaliana
2.2e-52
208.4
570
29.3
SPBC1198.10c
Schizosaccharomyces pombe
1.9e-51
205.3
522
33.0
YCR024C
Saccharomyces cerevisiae strain S288C
3.2e-51
204.5
520
31.3
ptri218160
Phaeodactylum tricornutum
3.5e-50
201.1
545
27.7
YHR019C
Saccharomyces cerevisiae strain S288C
2.8e-47
191.4
523
28.1
FBgn0034177
Drosophila melanogaster
3.6e-47
191.0
523
29.4
PSNMU-V1.4_AUG-EV-PASAV3_0041600
Pseudo-nitzschia multistriata
1.8e-46
188.7
349
35.2
Cre03.g193800
Chlamydomonas reinhardtii
1.5e-45
185.7
517
29.2
gsu109170
Galdieria sulphuraria
9.2e-43
176.4
500
30.0
emh194680
Emiliania huxleyi
6.0e-42
173.7
374
33.7
FBgn0086443
Drosophila melanogaster
5.1e-41
170.6
519
27.7
ccr56040
Chondrus crispus
8.6e-41
169.9
523
27.9
WBGene00013447
Caenorhabditis elegans
2.1e-39
165.2
435
29.9
emh452810
Emiliania huxleyi
1.8e-38
162.2
386
32.1
SPBC1773.10c
Schizosaccharomyces pombe
1.2e-37
159.5
525
27.6
CM13G00980
Cyanidioschyzon merolae
2.6e-37
158.3
365
31.2
ENSG00000134440
Homo sapiens
8.4e-36
153.3
502
26.5
WBGene00003815
Caenorhabditis elegans
5.4e-35
150.6
505
27.3
gsu109190
Galdieria sulphuraria
3.1e-30
134.8
458
28.6
CC00G24230
Cyclotella cryptica
8.4e-28
126.7
133
47.4
AT3G07420
Arabidopsis thaliana
7.9e-26
120.2
562
23.7
CC00G207840
Cyclotella cryptica
1.7e-25
119.0
109
49.5
CC00G146270
Cyclotella cryptica
4.3e-24
114.4
287
32.8
Ec-06_003810
Ectocarpus siliculosus
7.1e-19
97.1
458
24.2
Naga_100047g38
Nannochloropsis gaditana
1.2e-18
96.3
413
24.2
fso01010
Fistulifera solaris
2.1e-18
95.5
365
24.7
tps60240
Thalassiosira pseudonana
4.6e-18
94.4
365
23.0
CC00G36660
Cyclotella cryptica
6.0e-18
94.0
392
23.0
fso188120
Fistulifera solaris
6.0e-18
94.0
365
24.7
AT4G26870
Arabidopsis thaliana
7.9e-18
93.6
365
23.6
gsu78900
Galdieria sulphuraria
1.0e-17
93.2
448
24.6
CM10G02200
Cyanidioschyzon merolae
1.3e-17
92.8
366
23.5
tho78980
Thalassiosira oceanica
1.3e-17
92.8
365
23.0
Sro1100_g241300
Seminavis robusta
6.7e-17
90.5
365
22.5
Pp3c21_10900
Physcomitrella patens
2.5e-16
88.6
505
24.2
ENSG00000115866
Homo sapiens
7.4e-16
87.0
415
22.9
ptri107760
Phaeodactylum tricornutum
1.3e-15
86.3
364
21.7
sya00G51230
Synedra acus
1.3e-15
86.3
365
23.0
sya00G200610
Synedra acus
1.3e-15
86.3
365
23.0
AT4G31180
Arabidopsis thaliana
1.8e-14
82.4
467
22.9
pte493770
Paramecium tetraurelia
1.8e-14
82.4
361
22.7
pte36220
Paramecium tetraurelia
3.1e-14
81.6
361
22.4
ccr22700
Chondrus crispus
4.0e-14
81.3
363
25.3
gene15008
Fragilariopsis cylindrus
1.2e-13
79.7
365
21.9
PSNMU-V1.4_AUG-EV-PASAV3_0037510
Pseudo-nitzschia multistriata
1.2e-13
79.7
363
21.2
WBGene00001094
Caenorhabditis elegans
1.5e-13
79.3
367
23.2
ps00G153620
Pseudo-nitzschia multiseries
1.5e-13
79.3
363
21.8
FBgn0002069
Drosophila melanogaster
3.4e-13
78.2
362
24.6
SPCC1223.07c
Schizosaccharomyces pombe
1.0e-12
76.6
497
21.9
Cre06.g279150
Chlamydomonas reinhardtii
2.2e-12
75.5
371
24.8
Naga_100431g3
Nannochloropsis gaditana
3.8e-12
74.7
454
21.6
Ec-19_005440
Ectocarpus siliculosus
1.4e-11
72.8
113
30.1
YLL018C
Saccharomyces cerevisiae strain S288C
1.2e-10
69.7
364
21.7
AA0002G00520
Aureococcus anophagefferens
2.7e-10
68.6
291
24.1
Ec-19_000900
Ectocarpus siliculosus
8.7e-09
63.5
365
23.0
YNL073W
Saccharomyces cerevisiae strain S288C
1.9e-08
62.4
371
22.4
AT4G33760
Arabidopsis thaliana
7.4e-08
60.5
163
30.7
AA0023G00600
Aureococcus anophagefferens
1.3e-07
59.7
301
24.6
Cre09.g390986
Chlamydomonas reinhardtii
1.3e-07
59.7
84
39.3
CC00G157620
Cyclotella cryptica
1.3e-07
59.7
365
22.2
YDR037W
Saccharomyces cerevisiae strain S288C
1.6e-07
59.3
373
23.3
CM15G00440
Cyanidioschyzon merolae
3.7e-07
58.2
363
21.5
gsu94290
Galdieria sulphuraria
4.8e-07
57.8
370
23.2
emh642420
Emiliania huxleyi
1.8e-06
55.8
80
35.0
ptri13530
Phaeodactylum tricornutum
5.3e-06
54.3
108
25.9
AT1G68420
Arabidopsis thaliana
6.9e-06
53.9
66
42.4
gsu29170
Galdieria sulphuraria
6.9e-06
53.9
84
35.7
gsu29190
Galdieria sulphuraria
6.9e-06
53.9
84
35.7
AA0017G01290
Aureococcus anophagefferens
9.0e-06
53.5
513
21.6
ccr14920
Chondrus crispus
9.0e-06
53.5
85
32.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (5 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (4 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (7 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing