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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso118670
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso118670
Fistulifera solaris
0.0e+00
1191.8
577
100.0
fso31390
Fistulifera solaris
2.1e-298
1025.8
579
85.3
Sro1369_g266930
Seminavis robusta
7.0e-76
286.6
628
34.2
tho22100
Thalassiosira oceanica
2.0e-70
268.5
617
34.5
gene14800
Fragilariopsis cylindrus
6.5e-66
253.4
619
33.1
ps00G29420
Pseudo-nitzschia multiseries
2.3e-63
245.0
624
30.3
CC00G46510
Cyclotella cryptica
7.5e-62
240.0
695
30.6
PSNMU-V1.4_AUG-EV-PASAV3_0030360
Pseudo-nitzschia multistriata
1.2e-59
232.6
638
30.4
sya00G67070
Synedra acus
2.7e-27
125.2
300
34.7
Pp3c10_8190
Physcomitrella patens
2.0e-22
109.0
474
28.3
AT1G11880
Arabidopsis thaliana
9.3e-20
100.1
446
27.4
ENSG00000060642
Homo sapiens
3.5e-19
98.2
525
27.2
Ec-17_003500
Ectocarpus siliculosus
4.6e-19
97.8
587
25.4
FBgn0265174
Drosophila melanogaster
1.3e-18
96.3
509
25.9
Cre07.g320650
Chlamydomonas reinhardtii
6.2e-08
60.8
529
22.7
pte65550
Paramecium tetraurelia
2.6e-06
55.5
330
22.4
SPAC18B11.05
Schizosaccharomyces pombe
9.9e-06
53.5
181
29.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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