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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso117180
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso117180
Fistulifera solaris
0.0e+00
5949.0
3030
100.0
fso50450
Fistulifera solaris
0.0e+00
5535.7
3032
93.0
ptri97370
Phaeodactylum tricornutum
0.0e+00
3108.5
3220
53.4
Sro397_g134430
Seminavis robusta
0.0e+00
2936.4
3155
51.7
ps00G39060
Pseudo-nitzschia multiseries
0.0e+00
2424.8
3204
46.1
CC00G17000
Cyclotella cryptica
0.0e+00
2147.1
3262
42.0
tps205130
Thalassiosira pseudonana
0.0e+00
2103.2
3510
40.5
sya00G187300
Synedra acus
0.0e+00
2001.1
2025
55.1
PSNMU-V1.4_AUG-EV-PASAV3_0065810
Pseudo-nitzschia multistriata
0.0e+00
1818.9
2054
53.0
Sro397_g134410
Seminavis robusta
0.0e+00
1431.0
1799
46.5
tho145400
Thalassiosira oceanica
0.0e+00
1377.1
2005
42.5
sya00G61890
Synedra acus
3.9e-178
628.6
838
44.7
sya00G144450
Synedra acus
3.6e-163
578.9
831
42.5
gene6541
Fragilariopsis cylindrus
1.5e-89
334.3
284
63.0
Naga_100023g38
Nannochloropsis gaditana
2.4e-82
310.5
3014
22.5
ptri25880
Phaeodactylum tricornutum
2.8e-22
110.9
111
44.1
Naga_100073g7
Nannochloropsis gaditana
3.6e-22
110.5
104
46.2
gene16175
Fragilariopsis cylindrus
6.1e-22
109.8
82
51.2
gene4450
Fragilariopsis cylindrus
6.1e-22
109.8
82
51.2
ps00G146680
Pseudo-nitzschia multiseries
8.0e-22
109.4
73
56.2
tps162180
Thalassiosira pseudonana
1.8e-21
108.2
103
47.6
PSNMU-V1.4_AUG-EV-PASAV3_0044840
Pseudo-nitzschia multistriata
4.0e-21
107.1
75
53.3
Ec-11_002810
Ectocarpus siliculosus
8.9e-21
105.9
70
57.1
fso22080
Fistulifera solaris
1.2e-20
105.5
114
43.0
fso131290
Fistulifera solaris
2.0e-20
104.8
114
43.0
Sro430_g141370
Seminavis robusta
2.0e-20
104.8
75
56.0
Sro1087_g239810
Seminavis robusta
3.4e-20
104.0
70
55.7
Ec-21_002440
Ectocarpus siliculosus
7.5e-20
102.8
201
31.8
emh202550
Emiliania huxleyi
2.9e-19
100.9
111
42.3
emh05340
Emiliania huxleyi
2.9e-19
100.9
111
42.3
sya00G39620
Synedra acus
6.4e-19
99.8
311
26.7
CC00G109250
Cyclotella cryptica
1.2e-17
95.5
81
49.4
gsu119960
Galdieria sulphuraria
5.9e-17
93.2
112
41.1
Pp3c10_20380
Physcomitrella patens
1.0e-16
92.4
84
51.2
tho249240
Thalassiosira oceanica
2.3e-16
91.3
175
35.4
ccr96920
Chondrus crispus
5.0e-16
90.1
109
41.3
ENSG00000159459
Homo sapiens
5.0e-16
90.1
162
32.1
ps00G146700
Pseudo-nitzschia multiseries
1.1e-15
89.0
97
46.4
AT5G02310
Arabidopsis thaliana
1.9e-15
88.2
78
50.0
Pp3c3_24510
Physcomitrella patens
1.9e-15
88.2
84
48.8
Pp3c8_2940
Physcomitrella patens
3.3e-15
87.4
68
52.9
Pp3c8_2930
Physcomitrella patens
3.3e-15
87.4
68
52.9
Pp3c7_22570
Physcomitrella patens
5.6e-15
86.7
97
38.1
WBGene00016326
Caenorhabditis elegans
7.3e-15
86.3
161
31.7
Cre02.g089237
Chlamydomonas reinhardtii
7.3e-15
86.3
70
45.7
FBgn0030809
Drosophila melanogaster
9.5e-15
85.9
80
45.0
Pp3c17_2850
Physcomitrella patens
2.1e-14
84.7
163
33.7
ENSG00000024048
Homo sapiens
2.8e-14
84.3
162
29.0
Pp3c3_37220
Physcomitrella patens
6.2e-14
83.2
68
51.5
Pp3c15_3560
Physcomitrella patens
1.0e-13
82.4
107
35.5
Pp3c9_4700
Physcomitrella patens
1.8e-13
81.6
69
44.9
SPAC15A10.11
Schizosaccharomyces pombe
1.8e-13
81.6
113
35.4
emh641100
Emiliania huxleyi
3.4e-12
77.4
158
32.9
SPBC19C7.02
Schizosaccharomyces pombe
9.8e-12
75.9
69
40.6
Pp3c2_29090
Physcomitrella patens
1.3e-11
75.5
86
41.9
ENSG00000144357
Homo sapiens
1.9e-10
71.6
69
37.7
emh55720
Emiliania huxleyi
3.5e-09
67.4
78
35.9
CC00G171740
Cyclotella cryptica
3.3e-07
60.8
139
35.3
tho406880
Thalassiosira oceanica
2.1e-06
58.2
279
26.5
WBGene00017373
Caenorhabditis elegans
3.6e-06
57.4
69
40.6
emh485450
Emiliania huxleyi
4.7e-06
57.0
147
30.6
pte191380
Paramecium tetraurelia
8.1e-06
56.2
68
35.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (4 genes)
Synedra acus (4 genes)
Physcomitrella patens (10 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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