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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso111360
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso111360
Fistulifera solaris
2.9e-252
872.5
560
100.0
fso175960
Fistulifera solaris
1.9e-171
604.0
565
76.1
Sro1246_g255810
Seminavis robusta
6.9e-12
73.9
194
31.4
Sro1235_g255000
Seminavis robusta
9.0e-12
73.6
176
29.5
Sro268_g103690
Seminavis robusta
1.0e-10
70.1
185
31.4
Sro274_g105310
Seminavis robusta
1.0e-10
70.1
190
29.5
fso53980
Fistulifera solaris
1.4e-09
66.2
125
37.6
Sro866_g212960
Seminavis robusta
1.4e-09
66.2
188
27.1
Sro60_g034730
Seminavis robusta
1.9e-09
65.9
190
27.4
Sro637_g179360
Seminavis robusta
2.5e-09
65.5
219
29.2
fso129620
Fistulifera solaris
3.2e-09
65.1
123
38.2
Sro1670_g289950
Seminavis robusta
5.5e-09
64.3
139
30.2
Sro688_g187411
Seminavis robusta
7.1e-09
63.9
247
28.7
sya00G233560
Synedra acus
9.3e-09
63.5
143
32.2
Sro1781_g297080
Seminavis robusta
1.2e-08
63.2
183
31.7
Sro2634_g333250
Seminavis robusta
1.2e-08
63.2
171
32.2
sya00G148180
Synedra acus
2.1e-08
62.4
168
26.8
Sro1267_g257661
Seminavis robusta
2.7e-08
62.0
208
27.9
Sro1755_g295570
Seminavis robusta
7.9e-08
60.5
154
33.1
Sro189_g081390
Seminavis robusta
1.0e-07
60.1
173
30.1
Sro1406_g269960
Seminavis robusta
1.3e-07
59.7
158
34.8
Sro678_g185900
Seminavis robusta
1.3e-07
59.7
190
30.0
Sro47_g027980
Seminavis robusta
1.3e-07
59.7
131
29.8
Sro99_g050740
Seminavis robusta
1.8e-07
59.3
198
26.3
sya00G85310
Synedra acus
3.0e-07
58.5
139
30.9
sya00G152350
Synedra acus
3.9e-07
58.2
142
31.0
Sro738_g195220
Seminavis robusta
5.1e-07
57.8
187
30.5
Sro123_g059410
Seminavis robusta
6.7e-07
57.4
184
27.7
sya00G39450
Synedra acus
6.7e-07
57.4
141
29.1
Sro97_g049940
Seminavis robusta
8.7e-07
57.0
192
27.1
Sro32_g020980
Seminavis robusta
8.7e-07
57.0
145
29.0
Sro99_g050810
Seminavis robusta
8.7e-07
57.0
183
29.0
Sro849_g210510
Seminavis robusta
1.1e-06
56.6
192
27.6
Sro476_g150511
Seminavis robusta
1.9e-06
55.8
145
28.3
Sro46_g027430
Seminavis robusta
1.9e-06
55.8
153
28.1
Sro1984_g309290
Seminavis robusta
1.9e-06
55.8
196
24.0
Sro192_g082540
Seminavis robusta
2.5e-06
55.5
148
32.4
Sro681_g186381
Seminavis robusta
2.5e-06
55.5
145
28.3
Sro2250_g320810
Seminavis robusta
2.5e-06
55.5
171
29.2
Sro670_g184711
Seminavis robusta
3.3e-06
55.1
173
30.6
Sro204_g086040
Seminavis robusta
4.3e-06
54.7
151
27.2
Sro2631_g333180
Seminavis robusta
5.7e-06
54.3
177
25.4
sya00G193910
Synedra acus
5.7e-06
54.3
147
27.2
Sro624_g177230
Seminavis robusta
7.4e-06
53.9
121
32.2
Sro32_g020700
Seminavis robusta
9.6e-06
53.5
161
28.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (35 genes)
Synedra acus (6 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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