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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
fso106390
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
fso106390
Fistulifera solaris
6.4e-275
947.6
504
100.0
fso36940
Fistulifera solaris
2.4e-258
892.5
504
94.8
ptri56660
Phaeodactylum tricornutum
2.7e-172
606.7
494
62.8
Sro117_g057410
Seminavis robusta
7.6e-143
508.8
400
62.5
PSNMU-V1.4_AUG-EV-PASAV3_0012770
Pseudo-nitzschia multistriata
1.4e-125
451.4
394
58.1
tps216670
Thalassiosira pseudonana
1.5e-114
414.8
383
54.6
tho69820
Thalassiosira oceanica
2.5e-109
397.5
439
48.1
sya00G128390
Synedra acus
3.0e-107
390.6
396
48.7
gene10711
Fragilariopsis cylindrus
4.8e-105
383.3
471
45.4
ps00G37580
Pseudo-nitzschia multiseries
4.5e-103
376.7
340
54.7
Naga_100061g19
Nannochloropsis gaditana
9.3e-101
369.0
388
47.4
sya00G216030
Synedra acus
3.1e-96
354.0
385
47.5
AA0001G03500
Aureococcus anophagefferens
3.4e-87
323.9
341
48.1
ENSG00000079335
Homo sapiens
6.3e-81
303.1
387
42.4
CC00G70760
Cyclotella cryptica
1.4e-80
302.0
333
48.3
ENSG00000081377
Homo sapiens
7.4e-74
279.6
343
41.4
FBgn0031952
Drosophila melanogaster
5.9e-71
270.0
384
38.0
Pp3c27_7750
Physcomitrella patens
4.4e-66
253.8
381
38.1
pte597700
Paramecium tetraurelia
5.4e-64
246.9
384
36.5
pte304360
Paramecium tetraurelia
7.0e-64
246.5
388
36.3
pte190120
Paramecium tetraurelia
2.7e-63
244.6
388
36.1
gsu96010
Galdieria sulphuraria
1.1e-61
239.2
329
42.2
Cre02.g105400
Chlamydomonas reinhardtii
6.1e-60
233.4
344
37.2
Ec-14_001060
Ectocarpus siliculosus
1.8e-59
231.9
355
37.7
AA0005G03130
Aureococcus anophagefferens
3.0e-59
231.1
347
38.0
WBGene00000383
Caenorhabditis elegans
2.1e-52
208.4
414
32.9
SPAC1782.09c
Schizosaccharomyces pombe
3.6e-52
207.6
383
34.7
YFR028C
Saccharomyces cerevisiae strain S288C
4.6e-47
190.7
340
35.0
Ec-02_001370
Ectocarpus siliculosus
1.0e-43
179.5
138
61.6
CM09G00920
Cyanidioschyzon merolae
1.3e-41
172.6
359
35.4
ENSG00000158079
Homo sapiens
5.4e-08
60.8
163
28.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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