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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
emh747730
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
emh747730
Emiliania huxleyi
2.6e-101
369.4
184
100.0
Pp3c6_7790
Physcomitrella patens
1.2e-10
68.2
103
36.9
Pp3c25_6520
Physcomitrella patens
6.2e-10
65.9
103
36.9
AT1G71980
Arabidopsis thaliana
2.3e-09
63.9
104
32.7
emh764270
Emiliania huxleyi
5.2e-09
62.8
40
55.0
Ec-27_006130
Ectocarpus siliculosus
6.8e-09
62.4
162
29.0
AT1G35625
Arabidopsis thaliana
1.2e-08
61.6
108
33.3
Ec-09_000080
Ectocarpus siliculosus
1.5e-08
61.2
75
42.7
WBGene00007666
Caenorhabditis elegans
2.0e-08
60.8
40
55.0
Pp3c10_8120
Physcomitrella patens
2.0e-08
60.8
103
34.0
AT4G09560
Arabidopsis thaliana
2.6e-08
60.5
105
31.4
PSNMU-V1.4_AUG-EV-PASAV3_0047720
Pseudo-nitzschia multistriata
2.6e-08
60.5
77
39.0
fso94460
Fistulifera solaris
3.4e-08
60.1
53
49.1
ptri35790
Phaeodactylum tricornutum
3.4e-08
60.1
59
42.4
ENSG00000108523
Homo sapiens
4.4e-08
59.7
107
34.6
AT1G22670
Arabidopsis thaliana
5.8e-08
59.3
57
43.9
emh670120
Emiliania huxleyi
5.8e-08
59.3
83
37.3
Pp3c1_34410
Physcomitrella patens
5.8e-08
59.3
102
32.4
AT1G20823
Arabidopsis thaliana
7.5e-08
58.9
101
32.7
Ec-24_001940
Ectocarpus siliculosus
7.5e-08
58.9
56
46.4
ENSG00000163162
Homo sapiens
7.5e-08
58.9
125
30.4
ps00G17180
Pseudo-nitzschia multiseries
7.5e-08
58.9
77
39.0
sya00G25790
Synedra acus
9.9e-08
58.5
60
46.7
AT1G35630
Arabidopsis thaliana
1.3e-07
58.2
110
30.9
AT5G52140
Arabidopsis thaliana
2.2e-07
57.4
44
50.0
gsu141830
Galdieria sulphuraria
2.9e-07
57.0
42
45.2
ptri81540
Phaeodactylum tricornutum
2.9e-07
57.0
53
43.4
sya00G191940
Synedra acus
2.9e-07
57.0
83
34.9
AT1G76410
Arabidopsis thaliana
3.7e-07
56.6
107
29.0
ENSG00000180233
Homo sapiens
3.7e-07
56.6
70
38.6
Pp3c16_18860
Physcomitrella patens
3.7e-07
56.6
85
36.5
Pp3c2_17560
Physcomitrella patens
3.7e-07
56.6
53
49.1
sya00G207190
Synedra acus
3.7e-07
56.6
74
33.8
tps88650
Thalassiosira pseudonana
3.7e-07
56.6
53
43.4
fso64340
Fistulifera solaris
4.9e-07
56.2
45
53.3
ENSG00000186187
Homo sapiens
4.9e-07
56.2
112
30.4
Naga_100152g8
Nannochloropsis gaditana
4.9e-07
56.2
51
37.3
fso91140
Fistulifera solaris
6.4e-07
55.8
53
43.4
ENSG00000082996
Homo sapiens
6.4e-07
55.8
32
59.4
Naga_100015g61
Nannochloropsis gaditana
6.4e-07
55.8
40
57.5
CM20G04430
Cyanidioschyzon merolae
8.3e-07
55.5
91
35.2
CC00G16200
Cyclotella cryptica
8.3e-07
55.5
60
36.7
PSNMU-V1.4_AUG-EV-PASAV3_0029140
Pseudo-nitzschia multistriata
8.3e-07
55.5
41
53.7
AT1G49850
Arabidopsis thaliana
1.1e-06
55.1
59
39.0
Cre16.g680117
Chlamydomonas reinhardtii
1.1e-06
55.1
56
41.1
fso99680
Fistulifera solaris
1.1e-06
55.1
33
60.6
gsu18840
Galdieria sulphuraria
1.1e-06
55.1
32
56.2
Pp3c25_15200
Physcomitrella patens
1.1e-06
55.1
110
28.2
Sro65_g036790
Seminavis robusta
1.1e-06
55.1
49
44.9
tho240700
Thalassiosira oceanica
1.1e-06
55.1
35
57.1
gene6225
Fragilariopsis cylindrus
1.4e-06
54.7
77
33.8
PSNMU-V1.4_AUG-EV-PASAV3_0023260
Pseudo-nitzschia multistriata
1.4e-06
54.7
42
45.2
CC00G65830
Cyclotella cryptica
1.9e-06
54.3
46
43.5
fso74690
Fistulifera solaris
1.9e-06
54.3
53
41.5
ENSG00000105428
Homo sapiens
1.9e-06
54.3
48
47.9
WBGene00019185
Caenorhabditis elegans
2.4e-06
53.9
38
52.6
CM15G01620
Cyanidioschyzon merolae
2.4e-06
53.9
56
42.9
Ec-27_004490
Ectocarpus siliculosus
2.4e-06
53.9
61
45.9
Ec-27_007010
Ectocarpus siliculosus
2.4e-06
53.9
41
51.2
fso92690
Fistulifera solaris
2.4e-06
53.9
78
30.8
AT5G66160
Arabidopsis thaliana
3.2e-06
53.5
57
45.6
FBgn0004919
Drosophila melanogaster
3.2e-06
53.5
75
36.0
gsu47620
Galdieria sulphuraria
3.2e-06
53.5
57
36.8
Pp3c9_2330
Physcomitrella patens
3.2e-06
53.5
69
36.2
ps00G36280
Pseudo-nitzschia multiseries
3.2e-06
53.5
32
59.4
Sro494_g154270
Seminavis robusta
3.2e-06
53.5
54
42.6
sya00G04050
Synedra acus
3.2e-06
53.5
43
41.9
sya00G206230
Synedra acus
3.2e-06
53.5
73
34.2
tho55240
Thalassiosira oceanica
3.2e-06
53.5
59
42.4
tho482540
Thalassiosira oceanica
3.2e-06
53.5
40
45.0
AT4G34040
Arabidopsis thaliana
4.1e-06
53.1
43
48.8
Ec-08_003750
Ectocarpus siliculosus
4.1e-06
53.1
64
37.5
Ec-07_001840
Ectocarpus siliculosus
4.1e-06
53.1
32
62.5
ENSG00000131263
Homo sapiens
4.1e-06
53.1
33
54.5
Naga_100191g7
Nannochloropsis gaditana
4.1e-06
53.1
47
48.9
Pp3c19_21510
Physcomitrella patens
4.1e-06
53.1
58
41.4
ps00G89230
Pseudo-nitzschia multiseries
4.1e-06
53.1
59
42.4
tps88250
Thalassiosira pseudonana
4.1e-06
53.1
54
40.7
CC00G123810
Cyclotella cryptica
5.4e-06
52.8
48
41.7
emh662550
Emiliania huxleyi
5.4e-06
52.8
153
28.1
gsu87600
Galdieria sulphuraria
5.4e-06
52.8
35
54.3
ENSG00000183579
Homo sapiens
5.4e-06
52.8
34
52.9
Pp3c23_10580
Physcomitrella patens
5.4e-06
52.8
54
46.3
ptri36050
Phaeodactylum tricornutum
5.4e-06
52.8
37
51.4
AT4G35480
Arabidopsis thaliana
7.1e-06
52.4
115
29.6
ccr141500
Chondrus crispus
7.1e-06
52.4
91
34.1
WBGene00023404
Caenorhabditis elegans
7.1e-06
52.4
36
55.6
FBgn0037442
Drosophila melanogaster
7.1e-06
52.4
36
52.8
Ec-06_004730
Ectocarpus siliculosus
7.1e-06
52.4
70
34.3
ENSG00000123091
Homo sapiens
7.1e-06
52.4
54
37.0
ENSG00000113269
Homo sapiens
7.1e-06
52.4
61
39.3
Pp3c15_2690
Physcomitrella patens
7.1e-06
52.4
81
29.6
Sro524_g159890
Seminavis robusta
7.1e-06
52.4
66
34.8
AT2G39720
Arabidopsis thaliana
9.2e-06
52.0
139
29.5
Cre16.g651400
Chlamydomonas reinhardtii
9.2e-06
52.0
42
50.0
Ec-05_006410
Ectocarpus siliculosus
9.2e-06
52.0
39
48.7
Ec-05_006400
Ectocarpus siliculosus
9.2e-06
52.0
39
48.7
ENSG00000070423
Homo sapiens
9.2e-06
52.0
54
38.9
ENSG00000239305
Homo sapiens
9.2e-06
52.0
42
47.6
ENSG00000181191
Homo sapiens
9.2e-06
52.0
54
37.0
Pp3c22_1990
Physcomitrella patens
9.2e-06
52.0
58
39.7
pte310600
Paramecium tetraurelia
9.2e-06
52.0
57
36.8
pte680280
Paramecium tetraurelia
9.2e-06
52.0
57
36.8
sya00G122820
Synedra acus
9.2e-06
52.0
68
36.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (10 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (13 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (13 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (3 genes)
Synedra acus (6 genes)
Physcomitrella patens (12 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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