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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
emh416860
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
emh416860
Emiliania huxleyi
5.8e-304
1044.3
584
100.0
emh223620
Emiliania huxleyi
1.4e-302
1039.6
585
99.8
emh678790
Emiliania huxleyi
1.5e-14
82.8
175
32.6
gsu140630
Galdieria sulphuraria
3.5e-14
81.6
148
26.4
tps194540
Thalassiosira pseudonana
6.5e-13
77.4
134
29.1
sya00G17890
Synedra acus
4.2e-12
74.7
110
29.1
sya00G62160
Synedra acus
5.5e-12
74.3
92
32.6
sya00G12630
Synedra acus
1.6e-11
72.8
93
33.3
sya00G146550
Synedra acus
1.6e-11
72.8
93
33.3
YBR161W
Saccharomyces cerevisiae strain S288C
3.6e-11
71.6
148
26.4
YPL057C
Saccharomyces cerevisiae strain S288C
3.6e-11
71.6
157
27.4
Cre12.g522650
Chlamydomonas reinhardtii
4.7e-11
71.2
178
27.0
sya00G17630
Synedra acus
6.1e-11
70.9
141
27.7
Sro353_g124420
Seminavis robusta
2.3e-10
68.9
122
29.5
Cre11.g478650
Chlamydomonas reinhardtii
5.2e-10
67.8
112
27.7
sya00G17710
Synedra acus
1.1e-09
66.6
112
31.2
CC00G203200
Cyclotella cryptica
9.7e-09
63.5
111
29.7
AA0001G02270
Aureococcus anophagefferens
1.3e-08
63.2
97
33.0
tps39940
Thalassiosira pseudonana
1.7e-08
62.8
124
31.5
emh503910
Emiliania huxleyi
2.8e-08
62.0
149
26.8
emh346380
Emiliania huxleyi
2.8e-08
62.0
85
37.6
emh195420
Emiliania huxleyi
2.8e-08
62.0
85
37.6
emh363420
Emiliania huxleyi
3.7e-08
61.6
94
35.1
emh05480
Emiliania huxleyi
3.7e-08
61.6
94
35.1
ptri102620
Phaeodactylum tricornutum
4.8e-08
61.2
151
29.1
YJR075W
Saccharomyces cerevisiae strain S288C
6.3e-08
60.8
156
25.0
SPCC4F11.04c
Schizosaccharomyces pombe
8.2e-08
60.5
85
32.9
sya00G237520
Synedra acus
1.8e-07
59.3
67
34.3
Cre02.g116150
Chlamydomonas reinhardtii
2.4e-07
58.9
150
28.7
tps78900
Thalassiosira pseudonana
3.1e-07
58.5
99
26.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (8 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (7 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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