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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
emh362800
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
emh362800
Emiliania huxleyi
2.6e-220
766.1
469
100.0
Pp3c8_10390
Physcomitrella patens
1.1e-53
212.6
373
38.6
Pp3c24_6830
Physcomitrella patens
5.4e-53
210.3
373
38.3
AA0047G00240
Aureococcus anophagefferens
5.1e-51
203.8
333
36.6
ENSG00000107021
Homo sapiens
6.2e-49
196.8
401
33.4
FBgn0035916
Drosophila melanogaster
2.6e-47
191.4
406
34.0
AT1G04830
Arabidopsis thaliana
8.4e-46
186.4
368
35.3
Cre03.g195700
Chlamydomonas reinhardtii
1.9e-45
185.3
436
30.7
AT4G13730
Arabidopsis thaliana
3.2e-45
184.5
396
34.6
sya00G228890
Synedra acus
4.3e-42
174.1
265
39.2
WBGene00009726
Caenorhabditis elegans
1.4e-40
169.1
369
31.4
Sro483_g152060
Seminavis robusta
6.9e-40
166.8
226
42.9
CC00G165650
Cyclotella cryptica
1.5e-39
165.6
226
43.8
tho374620
Thalassiosira oceanica
5.8e-39
163.7
254
40.2
tho432140
Thalassiosira oceanica
5.8e-39
163.7
254
40.2
pte694530
Paramecium tetraurelia
1.0e-38
162.9
327
31.5
ptri38840
Phaeodactylum tricornutum
2.2e-38
161.8
363
32.0
Naga_100112g19
Nannochloropsis gaditana
9.3e-37
156.4
377
29.2
tps19310
Thalassiosira pseudonana
2.1e-36
155.2
207
43.5
Ec-14_003870
Ectocarpus siliculosus
2.5e-34
148.3
248
36.3
SPAC1952.17c
Schizosaccharomyces pombe
9.6e-34
146.4
198
41.9
PSNMU-V1.4_AUG-EV-PASAV3_0084050
Pseudo-nitzschia multistriata
2.6e-31
138.3
252
36.9
ps00G97830
Pseudo-nitzschia multiseries
1.3e-30
136.0
242
38.0
pte169190
Paramecium tetraurelia
5.0e-30
134.0
317
27.8
pte289260
Paramecium tetraurelia
1.6e-28
129.0
312
27.6
gene11920
Fragilariopsis cylindrus
1.3e-25
119.4
231
34.6
ENSG00000131374
Homo sapiens
5.3e-24
114.0
337
28.8
ccr134600
Chondrus crispus
1.3e-22
109.4
372
27.4
FBgn0038129
Drosophila melanogaster
6.5e-22
107.1
345
28.1
Ec-27_002980
Ectocarpus siliculosus
1.4e-21
105.9
291
27.8
CC00G117860
Cyclotella cryptica
3.2e-21
104.8
282
28.0
pte678450
Paramecium tetraurelia
3.2e-21
104.8
295
29.5
tps05390
Thalassiosira pseudonana
3.2e-21
104.8
282
28.0
FBgn0038855
Drosophila melanogaster
7.2e-21
103.6
304
27.6
CM20G03540
Cyanidioschyzon merolae
1.2e-20
102.8
314
30.3
ccr96380
Chondrus crispus
1.6e-20
102.4
299
30.1
Pp3c9_25750
Physcomitrella patens
1.6e-20
102.4
365
27.1
pte694790
Paramecium tetraurelia
3.6e-20
101.3
308
26.9
fso60810
Fistulifera solaris
4.6e-20
100.9
271
28.0
fso172830
Fistulifera solaris
6.1e-20
100.5
271
28.0
ptri146270
Phaeodactylum tricornutum
1.8e-19
99.0
303
28.4
tho134520
Thalassiosira oceanica
1.8e-19
99.0
280
26.8
pte499300
Paramecium tetraurelia
2.3e-19
98.6
295
27.8
Cre12.g486400
Chlamydomonas reinhardtii
3.9e-19
97.8
334
27.5
gene6293
Fragilariopsis cylindrus
1.1e-18
96.3
272
26.5
PSNMU-V1.4_AUG-EV-PASAV3_0060250
Pseudo-nitzschia multistriata
1.1e-18
96.3
272
25.7
SPBC530.01
Schizosaccharomyces pombe
2.6e-18
95.1
327
25.7
sya00G162590
Synedra acus
7.4e-18
93.6
287
27.2
ENSG00000054611
Homo sapiens
9.7e-18
93.2
367
24.8
ps00G170430
Pseudo-nitzschia multiseries
9.7e-18
93.2
314
24.5
Naga_100018g31
Nannochloropsis gaditana
4.8e-17
90.9
374
25.4
ENSG00000065491
Homo sapiens
2.4e-16
88.6
289
25.3
WBGene00007167
Caenorhabditis elegans
6.9e-16
87.0
327
25.7
YOR070C
Saccharomyces cerevisiae strain S288C
6.9e-16
87.0
262
24.4
ENSG00000121749
Homo sapiens
1.2e-15
86.3
291
24.1
WBGene00009322
Caenorhabditis elegans
4.5e-15
84.3
291
24.4
AA0001G02640
Aureococcus anophagefferens
5.9e-15
84.0
314
28.0
Pp3c20_14740
Physcomitrella patens
7.7e-15
83.6
306
27.5
gsu63080
Galdieria sulphuraria
2.9e-14
81.6
303
25.7
AT5G24390
Arabidopsis thaliana
1.4e-13
79.3
225
27.1
Sro518_g158780
Seminavis robusta
1.4e-13
79.3
300
24.0
emh339350
Emiliania huxleyi
1.9e-13
79.0
256
28.9
gsu116860
Galdieria sulphuraria
2.5e-13
78.6
207
28.0
pte410710
Paramecium tetraurelia
4.2e-13
77.8
172
28.5
ENSG00000104946
Homo sapiens
5.5e-13
77.4
306
25.8
Pp3c13_11070
Physcomitrella patens
7.2e-13
77.0
159
33.3
pte492990
Paramecium tetraurelia
2.1e-12
75.5
258
24.0
Pp3c26_10860
Physcomitrella patens
4.7e-12
74.3
138
34.8
FBgn0031233
Drosophila melanogaster
6.1e-12
73.9
323
26.6
AT3G49350
Arabidopsis thaliana
1.0e-11
73.2
224
25.4
AT5G41940
Arabidopsis thaliana
1.4e-11
72.8
227
27.3
AT5G53570
Arabidopsis thaliana
1.8e-11
72.4
218
25.7
SPAC630.05
Schizosaccharomyces pombe
1.8e-11
72.4
281
26.7
AT4G28550
Arabidopsis thaliana
1.5e-10
69.3
267
26.2
pte382560
Paramecium tetraurelia
2.0e-10
68.9
308
23.7
pte251670
Paramecium tetraurelia
2.6e-10
68.6
308
23.4
pte350810
Paramecium tetraurelia
2.6e-10
68.6
259
24.3
pte394980
Paramecium tetraurelia
2.6e-10
68.6
259
23.9
Pp3c3_9290
Physcomitrella patens
5.7e-10
67.4
271
27.3
Cre12.g532600
Chlamydomonas reinhardtii
2.8e-09
65.1
134
33.6
Cre17.g727450
Chlamydomonas reinhardtii
2.8e-09
65.1
178
27.5
YDL234C
Saccharomyces cerevisiae strain S288C
3.7e-09
64.7
192
23.4
Pp3c1_2510
Physcomitrella patens
6.3e-09
63.9
159
26.4
AT2G20440
Arabidopsis thaliana
1.1e-08
63.2
255
25.1
WBGene00008018
Caenorhabditis elegans
3.1e-08
61.6
214
26.6
emh608250
Emiliania huxleyi
5.3e-08
60.8
159
32.7
emh365940
Emiliania huxleyi
1.2e-07
59.7
166
27.7
emh258190
Emiliania huxleyi
1.2e-07
59.7
166
27.7
ENSG00000167291
Homo sapiens
1.2e-07
59.7
272
25.4
AT4G27100
Arabidopsis thaliana
1.6e-07
59.3
196
26.0
pte442640
Paramecium tetraurelia
5.9e-07
57.4
240
22.1
pte762530
Paramecium tetraurelia
5.9e-07
57.4
246
22.8
WBGene00018639
Caenorhabditis elegans
7.7e-07
57.0
201
25.9
gsu16350
Galdieria sulphuraria
7.7e-07
57.0
262
22.1
AT3G59570
Arabidopsis thaliana
1.0e-06
56.6
131
26.7
AT2G43490
Arabidopsis thaliana
1.3e-06
56.2
170
25.3
Ec-05_003850
Ectocarpus siliculosus
1.7e-06
55.8
173
30.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (11 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (14 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing