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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
emh234870
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
emh234870
Emiliania huxleyi
3.8e-105
382.1
180
100.0
emh670020
Emiliania huxleyi
3.8e-12
73.2
81
45.7
AA0001G05650
Aureococcus anophagefferens
9.3e-11
68.6
161
34.8
emh559500
Emiliania huxleyi
1.3e-09
64.7
61
42.6
emh264130
Emiliania huxleyi
1.3e-09
64.7
88
36.4
emh469100
Emiliania huxleyi
2.3e-09
63.9
87
35.6
gene16872
Fragilariopsis cylindrus
3.0e-09
63.5
77
36.4
Naga_100008g49
Nannochloropsis gaditana
3.0e-09
63.5
72
40.3
Cre12.g517800
Chlamydomonas reinhardtii
3.9e-09
63.2
118
35.6
ps00G155110
Pseudo-nitzschia multiseries
3.9e-09
63.2
56
48.2
Sro364_g127030
Seminavis robusta
3.9e-09
63.2
62
43.5
Sro2062_g313040
Seminavis robusta
8.7e-09
62.0
74
36.5
Cre12.g517850
Chlamydomonas reinhardtii
1.1e-08
61.6
99
31.3
pte391610
Paramecium tetraurelia
1.5e-08
61.2
73
37.0
ps00G172810
Pseudo-nitzschia multiseries
1.9e-08
60.8
74
36.5
pte120290
Paramecium tetraurelia
1.9e-08
60.8
70
35.7
Sro281_g107280
Seminavis robusta
1.9e-08
60.8
74
36.5
PSNMU-V1.4_AUG-EV-PASAV3_0017150
Pseudo-nitzschia multistriata
2.5e-08
60.5
59
45.8
ptri127180
Phaeodactylum tricornutum
2.5e-08
60.5
74
33.8
pte347660
Paramecium tetraurelia
3.3e-08
60.1
72
36.1
fso86310
Fistulifera solaris
4.3e-08
59.7
78
34.6
fso108990
Fistulifera solaris
4.3e-08
59.7
78
34.6
emh254850
Emiliania huxleyi
7.4e-08
58.9
36
58.3
pte654870
Paramecium tetraurelia
7.4e-08
58.9
77
35.1
Ec-16_000700
Ectocarpus siliculosus
9.6e-08
58.5
70
35.7
pte461900
Paramecium tetraurelia
9.6e-08
58.5
77
37.7
pte351730
Paramecium tetraurelia
1.6e-07
57.8
82
34.1
pte436320
Paramecium tetraurelia
1.6e-07
57.8
82
34.1
pte540320
Paramecium tetraurelia
2.1e-07
57.4
83
37.3
pte530050
Paramecium tetraurelia
3.7e-07
56.6
83
37.3
WBGene00008433
Caenorhabditis elegans
4.8e-07
56.2
76
39.5
pte696730
Paramecium tetraurelia
8.2e-07
55.5
70
34.3
AA0034G00170
Aureococcus anophagefferens
1.1e-06
55.1
62
38.7
pte743780
Paramecium tetraurelia
1.8e-06
54.3
70
32.9
pte765510
Paramecium tetraurelia
1.8e-06
54.3
70
32.9
pte168430
Paramecium tetraurelia
2.4e-06
53.9
66
37.9
pte730230
Paramecium tetraurelia
2.4e-06
53.9
70
32.9
Naga_100001g62
Nannochloropsis gaditana
3.1e-06
53.5
66
40.9
emh742460
Emiliania huxleyi
4.1e-06
53.1
84
32.1
emh144950
Emiliania huxleyi
4.1e-06
53.1
84
32.1
pte765930
Paramecium tetraurelia
4.1e-06
53.1
71
32.4
tps120590
Thalassiosira pseudonana
4.1e-06
53.1
70
30.0
pte743420
Paramecium tetraurelia
5.3e-06
52.8
71
32.4
gsu14010
Galdieria sulphuraria
6.9e-06
52.4
64
37.5
gsu14030
Galdieria sulphuraria
6.9e-06
52.4
64
37.5
ENSG00000136536
Homo sapiens
6.9e-06
52.4
59
40.7
Pp3c2_2130
Physcomitrella patens
6.9e-06
52.4
68
35.3
pte557330
Paramecium tetraurelia
6.9e-06
52.4
70
34.3
pte697130
Paramecium tetraurelia
6.9e-06
52.4
36
50.0
AT1G11020
Arabidopsis thaliana
9.0e-06
52.0
59
40.7
AT4G34100
Arabidopsis thaliana
9.0e-06
52.0
69
36.2
pte77300
Paramecium tetraurelia
9.0e-06
52.0
70
31.4
pte239960
Paramecium tetraurelia
9.0e-06
52.0
71
29.6
pte730690
Paramecium tetraurelia
9.0e-06
52.0
57
36.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (8 genes)
Paramecium tetraurelia (21 genes)
Seminavis robusta (3 genes)
Synedra acus (0 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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