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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
emh127370
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
emh127370
Emiliania huxleyi
0.0e+00
1515.4
1007
100.0
emh273490
Emiliania huxleyi
0.0e+00
1145.2
1059
78.8
ENSG00000164654
Homo sapiens
1.1e-20
104.0
256
28.1
FBgn0031399
Drosophila melanogaster
4.0e-18
95.5
240
28.3
SPAC12G12.01c
Schizosaccharomyces pombe
2.2e-16
89.7
225
31.1
Sro2_g001820
Seminavis robusta
1.6e-14
83.6
294
25.5
fso154340
Fistulifera solaris
5.9e-14
81.6
268
25.4
fso101080
Fistulifera solaris
1.0e-13
80.9
268
25.0
sya00G250500
Synedra acus
1.5e-12
77.0
310
23.5
YBL104C
Saccharomyces cerevisiae strain S288C
1.6e-11
73.6
255
26.3
tps36580
Thalassiosira pseudonana
1.6e-11
73.6
108
38.9
tho590640
Thalassiosira oceanica
8.0e-11
71.2
68
44.1
CC00G104590
Cyclotella cryptica
1.5e-09
67.0
272
24.3
pte663160
Paramecium tetraurelia
7.5e-09
64.7
38
55.3
ps00G53220
Pseudo-nitzschia multiseries
2.4e-07
59.7
139
30.9
ptri196930
Phaeodactylum tricornutum
7.8e-06
54.7
303
24.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
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