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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ccr70800
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ccr70800
Chondrus crispus
8.5e-166
584.3
303
100.0
gsu133340
Galdieria sulphuraria
2.7e-103
376.7
293
62.1
Pp3c16_16110
Physcomitrella patens
6.4e-97
355.5
300
56.0
AT3G11270
Arabidopsis thaliana
2.7e-95
350.1
290
56.9
AT5G05780
Arabidopsis thaliana
4.6e-95
349.4
287
57.1
emh684370
Emiliania huxleyi
6.6e-94
345.5
280
56.8
emh124350
Emiliania huxleyi
6.6e-94
345.5
280
56.8
Ec-02_003040
Ectocarpus siliculosus
5.6e-93
342.4
277
58.8
ENSG00000103035
Homo sapiens
5.6e-93
342.4
269
61.0
Cre06.g278256
Chlamydomonas reinhardtii
1.8e-91
337.4
289
54.7
AA0029G00180
Aureococcus anophagefferens
1.9e-85
317.4
276
55.4
WBGene00004464
Caenorhabditis elegans
9.6e-85
315.1
279
54.1
SPCC1682.10
Schizosaccharomyces pombe
3.2e-80
300.1
304
49.0
ps00G76190
Pseudo-nitzschia multiseries
3.9e-78
293.1
282
52.5
fso58710
Fistulifera solaris
8.7e-78
292.0
282
50.4
gene7892
Fragilariopsis cylindrus
7.4e-77
288.9
276
52.9
Sro1985_g309420
Seminavis robusta
7.4e-77
288.9
284
51.1
fso144880
Fistulifera solaris
2.1e-76
287.3
282
51.1
tho368340
Thalassiosira oceanica
2.1e-76
287.3
293
49.8
PSNMU-V1.4_AUG-EV-PASAV3_0104020
Pseudo-nitzschia multistriata
3.7e-76
286.6
281
51.2
tps166260
Thalassiosira pseudonana
3.7e-76
286.6
313
48.6
CC00G185670
Cyclotella cryptica
4.8e-76
286.2
310
49.4
YOR261C
Saccharomyces cerevisiae strain S288C
1.4e-75
284.6
296
48.0
CM20G04310
Cyanidioschyzon merolae
1.2e-74
281.6
302
48.7
ptri215090
Phaeodactylum tricornutum
1.9e-72
274.2
275
48.7
pte261780
Paramecium tetraurelia
5.1e-70
266.2
272
46.7
pte557650
Paramecium tetraurelia
5.1e-70
266.2
272
46.7
Naga_100998g2
Nannochloropsis gaditana
1.9e-40
167.9
118
63.6
sya00G04700
Synedra acus
4.5e-34
146.7
113
56.6
Ec-15_000300
Ectocarpus siliculosus
8.3e-28
125.9
280
31.4
Cre16.g654500
Chlamydomonas reinhardtii
5.4e-27
123.2
279
31.9
Pp3c11_20930
Physcomitrella patens
5.0e-25
116.7
261
28.4
AT2G39990
Arabidopsis thaliana
2.5e-24
114.4
269
29.7
ENSG00000175390
Homo sapiens
2.5e-24
114.4
269
27.1
FBgn0037270
Drosophila melanogaster
2.3e-22
107.8
277
27.1
ccr37760
Chondrus crispus
2.0e-21
104.8
268
26.9
tho387260
Thalassiosira oceanica
1.3e-20
102.1
282
25.9
Pp3c7_5560
Physcomitrella patens
2.2e-20
101.3
239
28.5
ps00G134580
Pseudo-nitzschia multiseries
3.7e-20
100.5
280
25.4
tps215930
Thalassiosira pseudonana
4.9e-20
100.1
276
24.3
Pp3c14_22830
Physcomitrella patens
1.8e-19
98.2
288
25.3
AA0025G01060
Aureococcus anophagefferens
4.1e-19
97.1
276
27.2
ENSG00000168090
Homo sapiens
5.4e-19
96.7
272
24.3
Sro909_g219030
Seminavis robusta
2.0e-18
94.7
270
24.1
ptri164390
Phaeodactylum tricornutum
3.5e-18
94.0
281
25.6
Ec-27_003960
Ectocarpus siliculosus
5.9e-18
93.2
274
22.6
ENSG00000279081
Homo sapiens
5.9e-18
93.2
268
25.0
ENSG00000281175
Homo sapiens
5.9e-18
93.2
268
25.0
AT5G56280
Arabidopsis thaliana
1.3e-17
92.0
301
25.2
FBgn0033069
Drosophila melanogaster
3.9e-17
90.5
269
24.2
AT4G26430
Arabidopsis thaliana
5.0e-17
90.1
300
24.0
sya00G216510
Synedra acus
4.3e-16
87.0
291
24.7
fso166210
Fistulifera solaris
9.5e-16
85.9
283
25.1
gsu31330
Galdieria sulphuraria
3.1e-14
80.9
264
25.8
Naga_100220g5
Nannochloropsis gaditana
5.8e-13
76.6
248
24.2
sya00G216490
Synedra acus
3.7e-12
73.9
199
24.6
emh444620
Emiliania huxleyi
9.2e-11
69.3
215
27.4
Naga_100062g33
Nannochloropsis gaditana
2.7e-10
67.8
297
22.6
WBGene00001229
Caenorhabditis elegans
4.6e-10
67.0
299
25.1
CC00G04690
Cyclotella cryptica
1.6e-07
58.5
88
38.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing