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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ccr65580
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ccr65580
Chondrus crispus
2.2e-207
722.6
328
100.0
CM13G01410
Cyanidioschyzon merolae
5.2e-68
259.6
245
46.1
ccr36960
Chondrus crispus
6.8e-68
259.2
247
44.9
AT1G74770
Arabidopsis thaliana
1.4e-65
251.5
251
46.2
AT3G18290
Arabidopsis thaliana
3.9e-63
243.4
254
43.7
Cre05.g248550
Chlamydomonas reinhardtii
9.5e-62
238.8
246
44.3
Naga_100090g9
Nannochloropsis gaditana
3.1e-60
233.8
252
45.6
ccr161060
Chondrus crispus
2.0e-59
231.1
255
43.9
fso155640
Fistulifera solaris
5.8e-59
229.6
265
41.5
AT1G18910
Arabidopsis thaliana
1.3e-58
228.4
244
43.4
CC00G86210
Cyclotella cryptica
1.9e-57
224.6
258
42.2
gsu76240
Galdieria sulphuraria
1.6e-56
221.5
251
38.6
sya00G162130
Synedra acus
5.0e-55
216.5
253
41.9
Ec-26_004520
Ectocarpus siliculosus
1.1e-54
215.3
264
38.3
Pp3c6_1960
Physcomitrella patens
3.1e-52
207.2
258
38.8
Pp3c25_14501
Physcomitrella patens
4.0e-52
206.8
250
39.6
Pp3c25_14500
Physcomitrella patens
4.0e-52
206.8
250
39.6
tps146910
Thalassiosira pseudonana
8.9e-52
205.7
219
44.3
SPAC2F3.16
Schizosaccharomyces pombe
2.6e-51
204.1
253
36.4
ENSG00000163743
Homo sapiens
1.4e-49
198.4
228
39.0
fso150310
Fistulifera solaris
1.6e-45
184.9
217
40.6
AT5G22920
Arabidopsis thaliana
4.7e-45
183.3
250
36.4
ps00G05920
Pseudo-nitzschia multiseries
9.9e-43
175.6
262
34.4
ps00G33510
Pseudo-nitzschia multiseries
1.7e-42
174.9
245
37.1
Pp3c11_6970
Physcomitrella patens
4.9e-42
173.3
250
36.4
gene16313
Fragilariopsis cylindrus
6.4e-42
172.9
245
36.7
Cre17.g718300
Chlamydomonas reinhardtii
4.1e-41
170.2
251
36.7
Sro99_g050950
Seminavis robusta
5.4e-41
169.9
250
35.2
sya00G161050
Synedra acus
5.4e-41
169.9
248
35.9
fso77080
Fistulifera solaris
2.1e-40
167.9
245
35.5
Sro968_g226070
Seminavis robusta
3.5e-40
167.2
250
35.6
Pp3c14_5600
Physcomitrella patens
1.3e-39
165.2
250
34.4
Pp3c2_31820
Physcomitrella patens
1.3e-39
165.2
247
33.2
AT3G62970
Arabidopsis thaliana
1.5e-38
161.8
246
33.7
AT5G18650
Arabidopsis thaliana
1.9e-38
161.4
262
31.7
ptri130290
Phaeodactylum tricornutum
1.9e-38
161.4
245
34.7
Pp3c10_4820
Physcomitrella patens
1.2e-37
158.7
247
33.2
Pp3c1_6070
Physcomitrella patens
4.7e-37
156.8
247
33.2
tps130000
Thalassiosira pseudonana
4.7e-37
156.8
248
34.3
fso77050
Fistulifera solaris
1.1e-33
145.6
247
32.4
fso191720
Fistulifera solaris
1.4e-33
145.2
247
32.4
tho217020
Thalassiosira oceanica
1.4e-33
145.2
257
33.5
tho87860
Thalassiosira oceanica
3.5e-32
140.6
224
33.0
gene11141
Fragilariopsis cylindrus
3.9e-31
137.1
205
35.6
sya00G196410
Synedra acus
1.9e-30
134.8
318
28.9
tps142420
Thalassiosira pseudonana
2.5e-30
134.4
246
30.9
ccr27680
Chondrus crispus
7.3e-30
132.9
152
40.1
Sro70_g039030
Seminavis robusta
8.1e-29
129.4
320
29.1
AT5G25560
Arabidopsis thaliana
2.4e-28
127.9
212
28.3
ptri72160
Phaeodactylum tricornutum
2.4e-28
127.9
276
29.0
tps193950
Thalassiosira pseudonana
3.1e-28
127.5
246
31.3
pte243060
Paramecium tetraurelia
2.6e-27
124.4
253
31.2
fso43770
Fistulifera solaris
1.3e-26
122.1
293
28.3
fso64760
Fistulifera solaris
1.3e-26
122.1
293
28.3
ptri69840
Phaeodactylum tricornutum
1.1e-25
119.0
292
28.1
ccr143140
Chondrus crispus
1.4e-25
118.6
189
35.4
gene18213
Fragilariopsis cylindrus
1.9e-25
118.2
295
28.8
fso199510
Fistulifera solaris
1.9e-25
118.2
285
28.1
ps00G65070
Pseudo-nitzschia multiseries
3.2e-25
117.5
285
28.4
fso73640
Fistulifera solaris
5.4e-25
116.7
283
27.2
CC00G69060
Cyclotella cryptica
9.3e-25
115.9
149
38.3
CC00G149660
Cyclotella cryptica
3.0e-23
110.9
306
25.5
CC00G122160
Cyclotella cryptica
3.6e-21
104.0
215
31.2
Sro695_g188680
Seminavis robusta
9.0e-20
99.4
253
28.1
sya00G00440
Synedra acus
1.4e-17
92.0
164
34.1
Sro345_g122370
Seminavis robusta
1.8e-15
85.1
112
35.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (9 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (5 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing