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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ccr63000
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ccr63000
Chondrus crispus
0.0e+00
2330.4
1139
100.0
ENSG00000133706
Homo sapiens
7.3e-303
1041.6
1103
47.9
gsu143450
Galdieria sulphuraria
4.6e-297
1022.3
1125
47.1
FBgn0053123
Drosophila melanogaster
8.1e-294
1011.5
1109
46.4
CM17G03360
Cyanidioschyzon merolae
9.0e-285
981.5
1128
47.7
WBGene00003073
Caenorhabditis elegans
3.3e-279
963.0
1068
46.9
Pp3c1_8450
Physcomitrella patens
6.5e-275
948.7
1080
46.7
Pp3c1_8463
Physcomitrella patens
6.5e-275
948.7
1080
46.7
Ec-06_008730
Ectocarpus siliculosus
1.4e-269
931.0
1124
45.0
AT1G09620
Arabidopsis thaliana
3.0e-264
913.3
1111
44.2
ps00G73790
Pseudo-nitzschia multiseries
3.9e-248
859.8
1121
43.3
SPAC26F1.13c
Schizosaccharomyces pombe
1.4e-245
851.3
1133
41.6
Sro166_g074040
Seminavis robusta
2.6e-244
847.0
1096
43.3
fso31640
Fistulifera solaris
2.2e-243
844.0
1126
41.8
tps118260
Thalassiosira pseudonana
2.5e-242
840.5
1139
42.4
gene10536
Fragilariopsis cylindrus
4.2e-242
839.7
1100
43.0
fso118420
Fistulifera solaris
5.5e-242
839.3
1126
41.8
CC00G153370
Cyclotella cryptica
1.1e-239
831.6
1138
41.7
ptri178330
Phaeodactylum tricornutum
1.1e-239
831.6
1126
42.7
PSNMU-V1.4_AUG-EV-PASAV3_0003310
Pseudo-nitzschia multistriata
7.4e-239
828.9
1121
42.1
YPL160W
Saccharomyces cerevisiae strain S288C
4.8e-238
826.2
1127
40.8
emh124550
Emiliania huxleyi
1.4e-237
824.7
1139
41.6
AA0001G02450
Aureococcus anophagefferens
2.3e-232
807.4
1099
41.9
pte699740
Paramecium tetraurelia
1.2e-209
731.9
996
40.4
emh695930
Emiliania huxleyi
3.6e-209
730.3
1257
36.9
tho307560
Thalassiosira oceanica
2.7e-116
421.8
490
48.2
sya00G139200
Synedra acus
4.5e-111
404.4
667
36.9
tho448240
Thalassiosira oceanica
5.9e-111
404.1
463
44.3
Cre06.g293582
Chlamydomonas reinhardtii
3.8e-65
251.9
484
34.7
tho307540
Thalassiosira oceanica
3.2e-48
195.7
231
43.7
Naga_100007g121
Nannochloropsis gaditana
5.9e-10
68.6
365
20.3
Cre07.g350500
Chlamydomonas reinhardtii
2.1e-07
60.1
456
20.8
tho448220
Thalassiosira oceanica
4.7e-07
58.9
193
24.9
tho241180
Thalassiosira oceanica
3.0e-06
56.2
108
27.8
Ec-16_002540
Ectocarpus siliculosus
8.8e-06
54.7
95
33.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing