Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ccr169420
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ccr169420
Chondrus crispus
1.5e-309
1062.8
544
100.0
ENSG00000101751
Homo sapiens
2.2e-39
165.2
431
30.9
Cre03.g148050
Chlamydomonas reinhardtii
7.1e-38
160.2
513
27.7
emh530300
Emiliania huxleyi
2.2e-31
138.7
439
28.7
emh67860
Emiliania huxleyi
2.2e-31
138.7
439
28.7
gsu33630
Galdieria sulphuraria
1.6e-29
132.5
561
25.0
FBgn0037554
Drosophila melanogaster
1.0e-28
129.8
469
27.9
CM01G00620
Cyanidioschyzon merolae
5.8e-24
114.0
449
26.9
Sro556_g165920
Seminavis robusta
5.8e-24
114.0
360
28.1
fso64850
Fistulifera solaris
6.5e-23
110.5
582
25.3
sya00G252680
Synedra acus
1.9e-22
109.0
383
28.2
ptri207540
Phaeodactylum tricornutum
4.2e-22
107.8
404
25.7
ccr06940
Chondrus crispus
2.1e-21
105.5
451
27.7
fso43860
Fistulifera solaris
1.3e-20
102.8
523
24.9
emh540590
Emiliania huxleyi
1.8e-20
102.4
391
27.4
ps00G173860
Pseudo-nitzschia multiseries
8.7e-20
100.1
368
26.6
gsu71910
Galdieria sulphuraria
4.3e-19
97.8
484
25.0
Ec-01_006080
Ectocarpus siliculosus
4.8e-18
94.4
400
25.5
CM13G02840
Cyanidioschyzon merolae
6.9e-17
90.5
408
26.2
Pp3c14_23660
Physcomitrella patens
6.9e-17
90.5
423
23.9
AT5G44740
Arabidopsis thaliana
1.5e-16
89.4
246
29.7
emh225200
Emiliania huxleyi
2.0e-16
89.0
423
25.8
AA0002G04000
Aureococcus anophagefferens
5.9e-16
87.4
193
31.6
fso30800
Fistulifera solaris
1.7e-15
85.9
321
27.1
Pp3c8_17250
Physcomitrella patens
1.7e-15
85.9
294
26.9
Cre12.g550800
Chlamydomonas reinhardtii
5.0e-15
84.3
240
29.2
ENSG00000170734
Homo sapiens
3.2e-14
81.6
516
23.3
Naga_100321g4
Nannochloropsis gaditana
7.2e-14
80.5
569
22.5
fso119250
Fistulifera solaris
1.2e-13
79.7
319
26.0
emh725060
Emiliania huxleyi
2.1e-13
79.0
362
26.8
fso166840
Fistulifera solaris
1.0e-12
76.6
454
21.8
FBgn0037141
Drosophila melanogaster
1.4e-12
76.3
277
25.6
emh117440
Emiliania huxleyi
1.8e-12
75.9
94
44.7
tho187600
Thalassiosira oceanica
1.8e-12
75.9
323
24.1
pte497140
Paramecium tetraurelia
2.3e-12
75.5
384
24.2
tps112730
Thalassiosira pseudonana
1.5e-11
72.8
322
23.3
ccr44120
Chondrus crispus
1.9e-11
72.4
279
25.1
PSNMU-V1.4_AUG-EV-PASAV3_0099850
Pseudo-nitzschia multistriata
1.9e-11
72.4
143
33.6
Ec-17_000370
Ectocarpus siliculosus
2.5e-11
72.0
204
31.9
ptri32900
Phaeodactylum tricornutum
3.3e-11
71.6
320
24.1
AT1G49980
Arabidopsis thaliana
5.7e-11
70.9
350
24.9
tps207050
Thalassiosira pseudonana
9.7e-11
70.1
218
28.0
gsu07230
Galdieria sulphuraria
1.3e-10
69.7
236
25.4
Pp3c22_4740
Physcomitrella patens
1.3e-10
69.7
265
24.2
pte645160
Paramecium tetraurelia
2.8e-10
68.6
369
22.8
sya00G252360
Synedra acus
3.7e-10
68.2
331
24.2
WBGene00018721
Caenorhabditis elegans
8.2e-10
67.0
248
24.6
Naga_100010g99
Nannochloropsis gaditana
8.2e-10
67.0
235
26.8
pte538790
Paramecium tetraurelia
8.2e-10
67.0
244
25.0
Cre02.g079850
Chlamydomonas reinhardtii
1.1e-09
66.6
236
26.3
pte531460
Paramecium tetraurelia
1.4e-09
66.2
244
22.5
Ec-14_004450
Ectocarpus siliculosus
4.1e-09
64.7
273
25.6
gene17968
Fragilariopsis cylindrus
4.1e-09
64.7
326
23.0
Sro142_g066040
Seminavis robusta
9.1e-09
63.5
306
22.5
SPCC553.07c
Schizosaccharomyces pombe
4.5e-08
61.2
259
23.6
tps200150
Thalassiosira pseudonana
4.5e-08
61.2
231
24.7
ENSG00000122008
Homo sapiens
5.9e-08
60.8
272
23.5
CC00G156980
Cyclotella cryptica
1.0e-07
60.1
269
25.3
WBGene00014066
Caenorhabditis elegans
1.3e-07
59.7
301
22.3
WBGene00017696
Caenorhabditis elegans
1.3e-07
59.7
285
23.2
CC00G27440
Cyclotella cryptica
2.2e-07
58.9
209
26.8
ENSG00000135945
Homo sapiens
3.8e-07
58.2
377
21.0
AT5G44750
Arabidopsis thaliana
5.0e-07
57.8
242
26.4
tho441720
Thalassiosira oceanica
5.0e-07
57.8
461
21.0
gene8065
Fragilariopsis cylindrus
1.4e-06
56.2
244
22.5
ps00G76180
Pseudo-nitzschia multiseries
1.9e-06
55.8
251
24.3
Naga_100015g71
Nannochloropsis gaditana
4.2e-06
54.7
251
22.7
SPBC1347.01c
Schizosaccharomyces pombe
5.5e-06
54.3
241
20.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing