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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ccr123420
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ccr123420
Chondrus crispus
8.1e-130
464.5
251
100.0
ENSG00000144410
Homo sapiens
7.6e-19
95.9
172
37.2
WBGene00021213
Caenorhabditis elegans
4.6e-16
86.7
170
34.1
WBGene00021984
Caenorhabditis elegans
1.0e-15
85.5
175
32.0
ENSG00000163751
Homo sapiens
1.0e-15
85.5
176
32.4
WBGene00020283
Caenorhabditis elegans
1.3e-15
85.1
182
33.5
WBGene00020281
Caenorhabditis elegans
1.3e-15
85.1
171
35.1
ENSG00000091704
Homo sapiens
1.3e-15
85.1
172
32.0
ENSG00000128510
Homo sapiens
5.1e-15
83.2
176
31.2
FBgn0031929
Drosophila melanogaster
8.7e-15
82.4
167
32.9
ENSG00000153002
Homo sapiens
7.4e-14
79.3
169
33.7
ENSG00000158516
Homo sapiens
1.3e-13
78.6
175
30.3
ENSG00000080618
Homo sapiens
2.1e-13
77.8
170
32.9
WBGene00012168
Caenorhabditis elegans
1.4e-12
75.1
207
28.5
FBgn0029804
Drosophila melanogaster
1.4e-12
75.1
175
33.7
WBGene00011235
Caenorhabditis elegans
2.0e-11
71.2
174
29.3
pte528120
Paramecium tetraurelia
1.1e-09
65.5
139
29.5
FBgn0030815
Drosophila melanogaster
5.5e-09
63.2
176
29.0
FBgn0035781
Drosophila melanogaster
4.6e-08
60.1
138
31.2
FBgn0035791
Drosophila melanogaster
6.7e-07
56.2
194
22.2
FBgn0035779
Drosophila melanogaster
8.7e-07
55.8
140
32.1
FBgn0035776
Drosophila melanogaster
1.5e-06
55.1
208
24.5
sya00G234800
Synedra acus
1.9e-06
54.7
115
33.9
tho391180
Thalassiosira oceanica
4.3e-06
53.5
164
29.3
tho51900
Thalassiosira oceanica
9.6e-06
52.4
156
28.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (7 genes)
Drosophila melanogaster (7 genes)
Caenorhabditis elegans (6 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (0 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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