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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YPL029W
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YPL029W
Saccharomyces cerevisiae strain S288C
0.0e+00
1466.8
738
100.0
SPAC637.11
Schizosaccharomyces pombe
2.7e-96
354.8
503
41.4
AT5G39840
Arabidopsis thaliana
2.8e-85
318.2
501
39.1
AT4G14790
Arabidopsis thaliana
1.8e-84
315.5
516
37.0
gsu110850
Galdieria sulphuraria
1.8e-84
315.5
505
39.0
Pp3c11_24680
Physcomitrella patens
6.0e-80
300.4
485
36.7
ENSG00000156502
Homo sapiens
7.3e-78
293.5
567
35.3
ps00G135460
Pseudo-nitzschia multiseries
6.2e-77
290.4
492
37.2
tho295100
Thalassiosira oceanica
1.1e-76
289.7
341
46.3
CC00G47930
Cyclotella cryptica
3.1e-76
288.1
488
37.5
AA0012G01140
Aureococcus anophagefferens
2.6e-75
285.0
492
38.2
tps94420
Thalassiosira pseudonana
4.4e-75
284.3
498
36.1
PSNMU-V1.4_AUG-EV-PASAV3_0048960
Pseudo-nitzschia multistriata
5.8e-75
283.9
498
36.9
FBgn0037232
Drosophila melanogaster
1.1e-73
279.6
519
35.3
sya00G151810
Synedra acus
1.1e-73
279.6
515
36.7
gene1104
Fragilariopsis cylindrus
4.1e-73
277.7
489
37.0
gene8944
Fragilariopsis cylindrus
1.2e-72
276.2
306
50.0
ptri190020
Phaeodactylum tricornutum
1.2e-72
276.2
485
37.3
Naga_100445g1
Nannochloropsis gaditana
3.5e-72
274.6
341
45.5
gsu141650
Galdieria sulphuraria
1.5e-70
269.2
485
35.9
Naga_100019g77
Nannochloropsis gaditana
4.0e-68
261.2
506
32.2
Sro345_g122490
Seminavis robusta
2.0e-67
258.8
555
33.5
WBGene00007444
Caenorhabditis elegans
9.9e-67
256.5
534
33.0
Ec-11_000550
Ectocarpus siliculosus
3.2e-65
251.5
524
33.8
CM16G01410
Cyanidioschyzon merolae
3.0e-63
245.0
630
30.3
Cre06.g270900
Chlamydomonas reinhardtii
2.5e-41
172.2
584
25.2
AA0016G01420
Aureococcus anophagefferens
8.7e-31
137.1
300
34.7
sya00G127370
Synedra acus
2.0e-27
125.9
286
32.5
ps00G40990
Pseudo-nitzschia multiseries
1.9e-25
119.4
311
31.8
CC00G82340
Cyclotella cryptica
1.2e-08
63.5
334
21.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
No editing