Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YOR058C
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YOR058C
Saccharomyces cerevisiae strain S288C
0.0e+00
1680.6
886
100.0
SPAPB1A10.09
Schizosaccharomyces pombe
3.3e-16
89.0
539
24.3
gene16983
Fragilariopsis cylindrus
4.3e-16
88.6
273
28.6
fso126720
Fistulifera solaris
8.1e-15
84.3
266
28.9
ps00G13900
Pseudo-nitzschia multiseries
8.1e-15
84.3
265
28.7
ps00G48420
Pseudo-nitzschia multiseries
8.1e-15
84.3
265
28.7
fso45520
Fistulifera solaris
3.1e-14
82.4
266
28.6
tho351560
Thalassiosira oceanica
5.2e-14
81.6
249
29.7
ptri231130
Phaeodactylum tricornutum
8.9e-14
80.9
285
27.7
PSNMU-V1.4_AUG-EV-PASAV3_0081680
Pseudo-nitzschia multistriata
2.0e-13
79.7
266
26.7
CC00G27290
Cyclotella cryptica
8.4e-12
74.3
249
28.9
Sro151_g069220
Seminavis robusta
1.1e-11
73.9
243
28.4
tps196810
Thalassiosira pseudonana
1.4e-11
73.6
270
27.0
gsu19930
Galdieria sulphuraria
1.1e-06
57.4
383
22.7
Ec-08_002240
Ectocarpus siliculosus
1.8e-06
56.6
324
24.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing