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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YMR293C
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YMR293C
Saccharomyces cerevisiae strain S288C
1.5e-267
922.9
465
100.0
Pp3s32_288
Physcomitrella patens
7.9e-70
266.2
427
37.7
ccr13280
Chondrus crispus
3.8e-64
247.3
419
35.8
gsu25710
Galdieria sulphuraria
6.4e-64
246.5
425
36.0
SPBC646.03
Schizosaccharomyces pombe
1.2e-62
242.3
406
36.2
AT3G25660
Arabidopsis thaliana
4.6e-62
240.4
428
35.3
Naga_100145g14
Nannochloropsis gaditana
8.7e-61
236.1
436
35.1
ENSG00000130348
Homo sapiens
5.6e-60
233.4
437
33.4
CM13G03180
Cyanidioschyzon merolae
6.2e-59
229.9
426
34.7
FBgn0260779
Drosophila melanogaster
4.0e-58
227.3
422
33.4
Naga_100055g13
Nannochloropsis gaditana
1.5e-57
225.3
456
34.6
Ec-02_005910
Ectocarpus siliculosus
1.3e-56
222.2
464
33.2
Pp3c27_1950
Physcomitrella patens
9.3e-55
216.1
428
33.2
Pp3c16_16670
Physcomitrella patens
2.1e-54
214.9
426
34.3
Cre10.g439400
Chlamydomonas reinhardtii
1.3e-53
212.2
433
33.7
Ec-17_003970
Ectocarpus siliculosus
1.5e-52
208.8
445
35.1
sya00G27650
Synedra acus
3.3e-52
207.6
534
30.1
WBGene00021508
Caenorhabditis elegans
8.2e-51
203.0
462
33.5
ps00G37690
Pseudo-nitzschia multiseries
2.7e-46
188.0
495
32.5
tps186090
Thalassiosira pseudonana
1.4e-42
175.6
440
30.5
tho134380
Thalassiosira oceanica
4.1e-42
174.1
404
31.9
sya00G269490
Synedra acus
9.1e-42
172.9
269
36.4
ptri94410
Phaeodactylum tricornutum
1.5e-41
172.2
484
29.3
fso61520
Fistulifera solaris
2.6e-41
171.4
491
30.1
fso165720
Fistulifera solaris
4.5e-41
170.6
483
29.2
PSNMU-V1.4_AUG-EV-PASAV3_0096050
Pseudo-nitzschia multistriata
5.9e-41
170.2
557
30.3
Sro835_g208790
Seminavis robusta
2.9e-40
167.9
501
29.7
gene2551
Fragilariopsis cylindrus
1.4e-39
165.6
557
28.0
CC00G49190
Cyclotella cryptica
3.8e-32
141.0
398
30.2
AA0008G01570
Aureococcus anophagefferens
2.1e-30
135.2
429
29.6
Pp3c7_6470
Physcomitrella patens
7.0e-26
120.2
165
41.2
Pp3c7_18330
Physcomitrella patens
9.1e-26
119.8
429
25.4
Pp3c11_9200
Physcomitrella patens
1.2e-25
119.4
445
24.9
AT1G08980
Arabidopsis thaliana
2.0e-25
118.6
404
27.5
AT5G64440
Arabidopsis thaliana
7.7e-25
116.7
433
26.1
Pp3c21_15890
Physcomitrella patens
1.7e-24
115.5
165
41.8
AT5G09420
Arabidopsis thaliana
1.1e-23
112.8
204
37.3
Pp3c19_12600
Physcomitrella patens
1.1e-23
112.8
174
38.5
YBR208C
Saccharomyces cerevisiae strain S288C
1.4e-21
105.9
183
38.3
AT3G17970
Arabidopsis thaliana
3.0e-21
104.8
205
36.1
Pp3c23_9920
Physcomitrella patens
1.5e-20
102.4
434
23.3
Cre08.g360100
Chlamydomonas reinhardtii
2.8e-19
98.2
159
37.7
SPAC869.01
Schizosaccharomyces pombe
3.1e-18
94.7
180
38.3
Pp3c26_13660
Physcomitrella patens
9.1e-18
93.2
435
24.6
ccr70580
Chondrus crispus
2.7e-17
91.7
159
36.5
gsu29930
Galdieria sulphuraria
3.5e-17
91.3
232
30.2
Pp3c20_10030
Physcomitrella patens
3.5e-17
91.3
136
41.2
Pp3c22_23080
Physcomitrella patens
5.9e-17
90.5
164
34.8
Pp3c21_15880
Physcomitrella patens
2.9e-16
88.2
129
38.0
Pp3c3_2980
Physcomitrella patens
6.5e-16
87.0
439
22.8
Cre11.g467630
Chlamydomonas reinhardtii
7.2e-15
83.6
168
33.3
gene8287
Fragilariopsis cylindrus
3.0e-13
78.2
132
37.1
gene3603
Fragilariopsis cylindrus
3.0e-13
78.2
177
31.6
gene4777
Fragilariopsis cylindrus
3.0e-13
78.2
137
33.6
pte409110
Paramecium tetraurelia
4.0e-13
77.8
377
24.7
gsu39360
Galdieria sulphuraria
6.8e-13
77.0
179
34.6
WBGene00019068
Caenorhabditis elegans
2.0e-12
75.5
290
27.2
Sro2231_g320030
Seminavis robusta
5.7e-12
73.9
180
29.4
pte448280
Paramecium tetraurelia
7.5e-12
73.6
247
28.7
emh316670
Emiliania huxleyi
9.8e-12
73.2
136
34.6
Cre02.g103350
Chlamydomonas reinhardtii
2.2e-11
72.0
179
27.4
emh740760
Emiliania huxleyi
2.2e-11
72.0
99
42.4
Sro235_g094770
Seminavis robusta
2.8e-11
71.6
130
33.1
FBgn0037547
Drosophila melanogaster
4.8e-11
70.9
145
33.1
Pp3c27_8370
Physcomitrella patens
8.3e-11
70.1
185
28.1
emh358020
Emiliania huxleyi
1.4e-10
69.3
141
31.2
emh307420
Emiliania huxleyi
1.4e-10
69.3
141
32.6
emh242700
Emiliania huxleyi
1.8e-10
68.9
141
32.6
ENSG00000117480
Homo sapiens
1.8e-10
68.9
245
26.1
Naga_100007g125
Nannochloropsis gaditana
1.8e-10
68.9
332
23.8
Pp3c4_17250
Physcomitrella patens
1.8e-10
68.9
182
29.1
Naga_100009g66
Nannochloropsis gaditana
3.1e-10
68.2
142
35.9
PSNMU-V1.4_AUG-EV-PASAV3_0033140
Pseudo-nitzschia multistriata
7.0e-10
67.0
129
32.6
PSNMU-V1.4_AUG-EV-PASAV3_0045870
Pseudo-nitzschia multistriata
7.0e-10
67.0
129
32.6
ps00G119150
Pseudo-nitzschia multiseries
7.0e-10
67.0
130
33.1
CM07G01720
Cyanidioschyzon merolae
9.1e-10
66.6
141
31.9
FBgn0039341
Drosophila melanogaster
9.1e-10
66.6
106
34.9
ENSG00000165591
Homo sapiens
9.1e-10
66.6
96
41.7
AA0001G02650
Aureococcus anophagefferens
1.2e-09
66.2
152
33.6
AT5G07360
Arabidopsis thaliana
1.2e-09
66.2
177
30.5
gene19057
Fragilariopsis cylindrus
1.2e-09
66.2
132
32.6
PSNMU-V1.4_AUG-EV-PASAV3_0037360
Pseudo-nitzschia multistriata
1.2e-09
66.2
147
33.3
Sro311_g114210
Seminavis robusta
1.2e-09
66.2
139
33.8
WBGene00013164
Caenorhabditis elegans
1.6e-09
65.9
142
31.0
pte540140
Paramecium tetraurelia
2.0e-09
65.5
140
29.3
pte530350
Paramecium tetraurelia
4.5e-09
64.3
131
29.0
AA0021G00720
Aureococcus anophagefferens
1.0e-08
63.2
100
37.0
FBgn0037548
Drosophila melanogaster
1.3e-08
62.8
241
25.3
ptri127600
Phaeodactylum tricornutum
3.8e-08
61.2
135
31.1
FBgn0033717
Drosophila melanogaster
5.0e-08
60.8
152
28.3
Sro3644_g349950
Seminavis robusta
1.1e-07
59.7
84
39.3
Sro90_g047240
Seminavis robusta
1.1e-07
59.7
103
38.8
Pp3c17_7850
Physcomitrella patens
1.5e-07
59.3
180
29.4
gene17238
Fragilariopsis cylindrus
1.9e-07
58.9
127
33.9
emh572820
Emiliania huxleyi
2.5e-07
58.5
156
26.9
Ec-06_009020
Ectocarpus siliculosus
5.5e-07
57.4
276
27.5
FBgn0038803
Drosophila melanogaster
9.5e-07
56.6
131
33.6
Sro93_g048360
Seminavis robusta
9.5e-07
56.6
133
34.6
Sro423_g139720
Seminavis robusta
1.6e-06
55.8
100
37.0
Pp3c10_23960
Physcomitrella patens
2.1e-06
55.5
133
28.6
ccr70340
Chondrus crispus
4.7e-06
54.3
202
25.2
SPBPB8B6.03
Schizosaccharomyces pombe
6.1e-06
53.9
219
23.7
WBGene00013226
Caenorhabditis elegans
8.0e-06
53.5
239
25.1
SPCC550.07
Schizosaccharomyces pombe
8.0e-06
53.5
157
27.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (6 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (6 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (4 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (8 genes)
Synedra acus (2 genes)
Physcomitrella patens (18 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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