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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YMR072W
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YMR072W
Saccharomyces cerevisiae strain S288C
7.1e-99
361.3
184
100.0
YKL032C
Saccharomyces cerevisiae strain S288C
1.0e-28
128.3
151
37.7
gene17050
Fragilariopsis cylindrus
6.2e-10
65.9
149
28.2
Cre11.g481050
Chlamydomonas reinhardtii
4.0e-09
63.2
188
26.1
CC00G144190
Cyclotella cryptica
1.5e-08
61.2
171
24.6
ptri12710
Phaeodactylum tricornutum
2.0e-08
60.8
143
25.2
CC00G93660
Cyclotella cryptica
2.6e-08
60.5
182
24.2
AT1G20693
Arabidopsis thaliana
3.4e-08
60.1
73
41.1
AT4G23800
Arabidopsis thaliana
4.4e-08
59.7
177
28.2
ptri169820
Phaeodactylum tricornutum
5.8e-08
59.3
157
27.4
Sro2137_g316050
Seminavis robusta
1.7e-07
57.8
170
25.9
pte395240
Paramecium tetraurelia
4.9e-07
56.2
82
30.5
pte177310
Paramecium tetraurelia
8.3e-07
55.5
161
25.5
ptri132230
Phaeodactylum tricornutum
8.3e-07
55.5
169
22.5
fso122470
Fistulifera solaris
1.1e-06
55.1
151
23.8
fso164560
Fistulifera solaris
1.1e-06
55.1
151
23.8
AT4G11080
Arabidopsis thaliana
1.4e-06
54.7
177
24.9
fso43290
Fistulifera solaris
1.9e-06
54.3
149
26.2
fso191540
Fistulifera solaris
2.4e-06
53.9
166
25.9
ps00G180140
Pseudo-nitzschia multiseries
2.4e-06
53.9
171
25.1
sya00G270400
Synedra acus
2.4e-06
53.9
76
35.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing