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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YLR208W
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YLR208W
Saccharomyces cerevisiae strain S288C
8.2e-113
408.3
298
100.0
SPBC215.15
Schizosaccharomyces pombe
4.3e-53
209.9
299
66.2
ENSG00000157020
Homo sapiens
8.1e-44
179.1
301
54.2
CC00G140360
Cyclotella cryptica
1.4e-40
168.3
302
31.8
Pp3c22_17920
Physcomitrella patens
5.4e-40
166.4
300
51.7
Ec-12_007790
Ectocarpus siliculosus
1.6e-39
164.9
292
49.3
Sro702_g189930
Seminavis robusta
2.1e-39
164.5
304
30.6
FBgn0024509
Drosophila melanogaster
3.5e-39
163.7
294
32.7
Pp3c19_9370
Physcomitrella patens
3.5e-39
163.7
292
52.4
Pp3c19_12500
Physcomitrella patens
7.8e-39
162.5
293
51.5
Pp3c22_20020
Physcomitrella patens
1.7e-38
161.4
292
51.7
AT3G01340
Arabidopsis thaliana
8.7e-38
159.1
294
63.9
ps00G174630
Pseudo-nitzschia multiseries
1.1e-37
158.7
301
41.2
ptri231850
Phaeodactylum tricornutum
1.1e-37
158.7
304
45.1
gene14464
Fragilariopsis cylindrus
4.3e-37
156.8
300
41.7
gene1572
Fragilariopsis cylindrus
5.6e-37
156.4
300
41.7
Cre17.g715750
Chlamydomonas reinhardtii
7.3e-37
156.0
293
29.7
gsu79930
Galdieria sulphuraria
1.3e-36
155.2
300
31.0
sya00G144690
Synedra acus
1.6e-36
154.8
299
46.5
fso53520
Fistulifera solaris
1.8e-35
151.4
312
34.6
fso129150
Fistulifera solaris
2.4e-35
151.0
312
30.1
AT2G30050
Arabidopsis thaliana
3.1e-35
150.6
292
63.4
tps29610
Thalassiosira pseudonana
5.3e-35
149.8
300
30.7
tho150740
Thalassiosira oceanica
1.6e-31
138.3
314
36.0
AA0009G02590
Aureococcus anophagefferens
9.6e-29
129.0
307
28.0
WBGene00003806
Caenorhabditis elegans
3.1e-27
124.0
290
28.3
ccr56640
Chondrus crispus
1.0e-25
119.0
284
29.6
CM10G01140
Cyanidioschyzon merolae
1.2e-18
95.5
158
32.9
PSNMU-V1.4_AUG-EV-PASAV3_0095210
Pseudo-nitzschia multistriata
1.4e-16
88.6
64
57.8
emh224540
Emiliania huxleyi
9.3e-16
85.9
59
59.3
Naga_101320g1
Nannochloropsis gaditana
6.1e-15
83.2
61
60.7
ENSG00000085415
Homo sapiens
4.3e-13
77.0
312
21.5
FBgn0033247
Drosophila melanogaster
9.7e-13
75.9
59
49.2
sya00G114070
Synedra acus
5.3e-11
70.1
138
30.4
tps215990
Thalassiosira pseudonana
9.0e-11
69.3
312
20.8
YGL100W
Saccharomyces cerevisiae strain S288C
1.7e-09
65.1
62
40.3
ptri164470
Phaeodactylum tricornutum
5.0e-09
63.5
320
20.6
pte445730
Paramecium tetraurelia
2.5e-08
61.2
277
19.5
Pp3c22_20100
Physcomitrella patens
3.2e-08
60.8
52
48.1
pte460870
Paramecium tetraurelia
1.6e-07
58.5
65
36.9
AT2G26060
Arabidopsis thaliana
7.9e-07
56.2
87
35.6
CC00G155200
Cyclotella cryptica
1.0e-06
55.8
151
27.2
fso166270
Fistulifera solaris
1.4e-06
55.5
136
27.2
PSNMU-V1.4_AUG-EV-PASAV3_0121290
Pseudo-nitzschia multistriata
2.3e-06
54.7
64
32.8
ps00G134570
Pseudo-nitzschia multiseries
3.0e-06
54.3
64
32.8
fso62050
Fistulifera solaris
3.9e-06
53.9
137
26.3
WBGene00003804
Caenorhabditis elegans
5.1e-06
53.5
60
41.7
pte758460
Paramecium tetraurelia
5.1e-06
53.5
62
35.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing