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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YLR148W
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YLR148W
Saccharomyces cerevisiae strain S288C
0.0e+00
1830.8
919
100.0
Pp3c14_1240
Physcomitrella patens
1.1e-46
190.3
805
21.9
AT1G12470
Arabidopsis thaliana
4.1e-46
188.3
788
22.6
SPCC790.02
Schizosaccharomyces pombe
1.0e-44
183.7
678
23.0
ENSG00000104142
Homo sapiens
3.3e-35
152.1
735
23.3
pte287330
Paramecium tetraurelia
8.3e-31
137.5
617
22.7
FBgn0000482
Drosophila melanogaster
1.4e-30
136.7
668
22.6
pte167490
Paramecium tetraurelia
3.2e-30
135.6
617
22.5
pte383320
Paramecium tetraurelia
4.0e-25
118.6
700
22.4
WBGene00021058
Caenorhabditis elegans
1.2e-24
117.1
725
20.3
Naga_100161g6
Nannochloropsis gaditana
3.6e-18
95.5
709
20.5
Ec-04_003020
Ectocarpus siliculosus
1.1e-14
84.0
639
19.6
Sro1179_g249660
Seminavis robusta
1.4e-09
67.0
274
25.5
gene5887
Fragilariopsis cylindrus
2.9e-07
59.3
266
24.4
PSNMU-V1.4_AUG-EV-PASAV3_0107620
Pseudo-nitzschia multistriata
1.9e-06
56.6
268
23.9
Cre07.g328550
Chlamydomonas reinhardtii
2.4e-06
56.2
453
18.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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