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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YJR075W
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YJR075W
Saccharomyces cerevisiae strain S288C
1.5e-231
803.1
397
100.0
SPAC1006.05c
Schizosaccharomyces pombe
4.0e-46
187.2
284
36.6
YGL038C
Saccharomyces cerevisiae strain S288C
8.9e-38
159.5
431
27.4
gsu103210
Galdieria sulphuraria
4.9e-20
100.5
268
27.6
gsu13330
Galdieria sulphuraria
9.2e-19
96.3
277
26.0
Cre12.g522650
Chlamydomonas reinhardtii
2.3e-17
91.7
279
28.7
CM20G06360
Cyanidioschyzon merolae
9.5e-16
86.3
270
24.8
Cre02.g116150
Chlamydomonas reinhardtii
2.1e-15
85.1
174
32.2
ptri219640
Phaeodactylum tricornutum
6.8e-14
80.1
163
30.7
tps39940
Thalassiosira pseudonana
2.6e-13
78.2
232
27.2
sya00G53300
Synedra acus
8.3e-12
73.2
181
28.2
Sro250_g098900
Seminavis robusta
4.1e-11
70.9
165
27.3
AA0001G02270
Aureococcus anophagefferens
2.1e-10
68.6
174
27.0
fso65330
Fistulifera solaris
3.5e-10
67.8
170
25.3
ps00G62700
Pseudo-nitzschia multiseries
3.5e-10
67.8
163
30.1
tps223760
Thalassiosira pseudonana
3.5e-10
67.8
174
26.4
gene6575
Fragilariopsis cylindrus
4.6e-10
67.4
163
29.4
PSNMU-V1.4_AUG-EV-PASAV3_0016140
Pseudo-nitzschia multistriata
1.0e-09
66.2
163
29.4
CC00G64320
Cyclotella cryptica
1.7e-09
65.5
162
25.9
fso64970
Fistulifera solaris
1.7e-09
65.5
170
24.7
CC00G120160
Cyclotella cryptica
3.0e-09
64.7
282
24.1
tps128430
Thalassiosira pseudonana
8.6e-09
63.2
162
26.5
emh416860
Emiliania huxleyi
4.3e-08
60.8
156
25.0
fso44900
Fistulifera solaris
7.3e-08
60.1
187
25.1
fso90720
Fistulifera solaris
7.3e-08
60.1
166
28.9
ptri215050
Phaeodactylum tricornutum
7.3e-08
60.1
187
25.1
emh223620
Emiliania huxleyi
9.5e-08
59.7
157
24.8
fso146590
Fistulifera solaris
1.2e-07
59.3
194
26.8
Sro80_g043010
Seminavis robusta
1.6e-07
58.9
164
25.6
sya00G62160
Synedra acus
2.1e-07
58.5
159
24.5
sya00G146550
Synedra acus
2.1e-07
58.5
159
24.5
sya00G12630
Synedra acus
4.7e-07
57.4
154
25.3
fso18270
Fistulifera solaris
6.2e-07
57.0
187
24.1
fso146580
Fistulifera solaris
1.4e-06
55.8
168
25.6
sya00G231520
Synedra acus
2.4e-06
55.1
156
26.3
Sro376_g129690
Seminavis robusta
5.2e-06
53.9
103
30.1
tps194540
Thalassiosira pseudonana
5.2e-06
53.9
136
29.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (7 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (5 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing