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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YJR006W
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YJR006W
Saccharomyces cerevisiae strain S288C
7.5e-289
993.8
488
100.0
SPAC27E2.05
Schizosaccharomyces pombe
1.5e-58
228.8
474
32.7
Pp3c3_28090
Physcomitrella patens
1.9e-58
228.4
455
32.5
gsu98590
Galdieria sulphuraria
3.4e-55
217.6
471
32.5
AT2G42120
Arabidopsis thaliana
1.4e-53
212.2
462
32.5
ENSG00000106628
Homo sapiens
5.9e-52
206.8
497
29.6
Ec-07_001590
Ectocarpus siliculosus
1.6e-49
198.7
455
30.5
FBgn0027903
Drosophila melanogaster
4.0e-48
194.1
469
29.2
ccr119860
Chondrus crispus
1.2e-41
172.6
511
29.4
WBGene00008722
Caenorhabditis elegans
7.5e-39
163.3
469
27.7
Cre08.g374050
Chlamydomonas reinhardtii
3.7e-38
161.0
534
25.5
pte204070
Paramecium tetraurelia
8.3e-38
159.8
477
28.9
pte340100
Paramecium tetraurelia
7.8e-36
153.3
479
28.6
fso123380
Fistulifera solaris
8.6e-35
149.8
443
26.2
tps166810
Thalassiosira pseudonana
1.1e-34
149.4
543
26.9
fso152640
Fistulifera solaris
5.6e-34
147.1
443
26.9
tho287920
Thalassiosira oceanica
7.3e-34
146.7
510
29.8
sya00G25930
Synedra acus
4.4e-31
137.5
442
28.3
ptri97110
Phaeodactylum tricornutum
2.9e-30
134.8
471
26.1
Sro635_g179200
Seminavis robusta
1.4e-29
132.5
458
25.1
CM02G00540
Cyanidioschyzon merolae
2.4e-29
131.7
395
26.8
gene7264
Fragilariopsis cylindrus
7.8e-28
126.7
492
25.6
PSNMU-V1.4_AUG-EV-PASAV3_0053590
Pseudo-nitzschia multistriata
1.0e-27
126.3
465
25.6
CC00G17270
Cyclotella cryptica
4.3e-26
120.9
526
26.4
Naga_100824g1
Nannochloropsis gaditana
5.6e-26
120.6
220
32.7
pte365600
Paramecium tetraurelia
3.6e-25
117.9
416
28.6
emh658190
Emiliania huxleyi
1.9e-18
95.5
413
24.9
ps00G56580
Pseudo-nitzschia multiseries
2.2e-14
82.0
491
22.6
Naga_101011g1
Nannochloropsis gaditana
3.6e-09
64.7
189
28.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing