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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YGL038C
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YGL038C
Saccharomyces cerevisiae strain S288C
4.8e-280
964.5
481
100.0
SPAC1006.05c
Schizosaccharomyces pombe
8.8e-48
193.0
402
32.6
YJR075W
Saccharomyces cerevisiae strain S288C
5.3e-37
157.1
431
27.4
Cre02.g116150
Chlamydomonas reinhardtii
6.3e-14
80.5
128
33.6
Cre12.g522650
Chlamydomonas reinhardtii
4.5e-12
74.3
183
25.7
tps39940
Thalassiosira pseudonana
7.7e-12
73.6
147
32.7
CM20G06360
Cyanidioschyzon merolae
1.9e-10
68.9
311
23.2
gsu13330
Galdieria sulphuraria
8.0e-09
63.5
275
26.2
gsu103210
Galdieria sulphuraria
1.8e-08
62.4
209
22.5
tps68470
Thalassiosira pseudonana
4.4e-07
57.8
107
35.5
CC00G106850
Cyclotella cryptica
1.7e-06
55.8
135
34.1
AA0001G02270
Aureococcus anophagefferens
2.2e-06
55.5
136
26.5
fso90720
Fistulifera solaris
2.2e-06
55.5
190
26.3
ptri219640
Phaeodactylum tricornutum
2.2e-06
55.5
112
28.6
SPAC17G8.11c
Schizosaccharomyces pombe
2.2e-06
55.5
124
30.6
tps223760
Thalassiosira pseudonana
2.8e-06
55.1
111
33.3
fso146590
Fistulifera solaris
3.7e-06
54.7
190
26.3
CC00G64320
Cyclotella cryptica
4.9e-06
54.3
108
33.3
fso44900
Fistulifera solaris
6.3e-06
53.9
227
23.8
fso65330
Fistulifera solaris
6.3e-06
53.9
112
30.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing