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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YDR328C
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YDR328C
Saccharomyces cerevisiae strain S288C
1.3e-82
307.4
195
100.0
SPBC409.05
Schizosaccharomyces pombe
3.7e-45
183.0
195
49.7
WBGene00004807
Caenorhabditis elegans
1.9e-33
144.1
116
61.2
FBgn0025637
Drosophila melanogaster
2.7e-32
140.2
118
55.9
Naga_100005g56
Nannochloropsis gaditana
1.8e-31
137.5
193
42.5
Pp3c20_7590
Physcomitrella patens
5.1e-31
136.0
191
39.8
Pp3c20_7680
Physcomitrella patens
5.1e-31
136.0
191
39.8
Cre12.g501200
Chlamydomonas reinhardtii
6.7e-31
135.6
192
39.1
Pp3c2_5520
Physcomitrella patens
6.7e-31
135.6
191
39.8
FBgn0026176
Drosophila melanogaster
4.4e-30
132.9
118
53.4
sya00G43790
Synedra acus
7.4e-30
132.1
190
42.1
tps71120
Thalassiosira pseudonana
9.7e-30
131.7
188
41.0
Ec-07_004070
Ectocarpus siliculosus
3.7e-29
129.8
197
40.6
gsu79490
Galdieria sulphuraria
3.7e-29
129.8
191
39.8
fso45850
Fistulifera solaris
1.4e-28
127.9
117
53.0
fso127120
Fistulifera solaris
1.4e-28
127.9
117
53.0
AA0002G06360
Aureococcus anophagefferens
3.1e-28
126.7
189
39.7
CC00G196720
Cyclotella cryptica
3.1e-28
126.7
195
37.9
AT1G75950
Arabidopsis thaliana
5.3e-28
125.9
115
53.0
ENSG00000113558
Homo sapiens
7.0e-28
125.6
192
38.5
WBGene00004808
Caenorhabditis elegans
9.1e-28
125.2
115
51.3
Sro661_g183260
Seminavis robusta
1.2e-27
124.8
117
52.1
AT4G34210
Arabidopsis thaliana
3.5e-27
123.2
112
53.6
ps00G17560
Pseudo-nitzschia multiseries
5.9e-27
122.5
191
50.3
AT5G42190
Arabidopsis thaliana
1.0e-26
121.7
198
36.4
gene8333
Fragilariopsis cylindrus
1.3e-26
121.3
117
52.1
AT1G20140
Arabidopsis thaliana
2.9e-26
120.2
189
37.0
PSNMU-V1.4_AUG-EV-PASAV3_0070030
Pseudo-nitzschia multistriata
2.9e-26
120.2
117
51.3
AT4G34470
Arabidopsis thaliana
6.5e-26
119.0
112
51.8
ptri215410
Phaeodactylum tricornutum
6.5e-26
119.0
119
51.3
Sro1056_g236200
Seminavis robusta
6.5e-26
119.0
117
49.6
AT3G21850
Arabidopsis thaliana
1.1e-25
118.2
114
51.8
WBGene00004809
Caenorhabditis elegans
3.2e-25
116.7
112
49.1
CM16G01190
Cyanidioschyzon merolae
3.2e-25
116.7
185
37.3
FBgn0034863
Drosophila melanogaster
3.2e-25
116.7
113
51.3
emh635360
Emiliania huxleyi
3.2e-25
116.7
190
37.9
sya00G13530
Synedra acus
6.1e-24
112.5
175
40.6
AT2G25700
Arabidopsis thaliana
1.4e-23
111.3
189
33.9
AT3G60010
Arabidopsis thaliana
1.4e-23
111.3
188
36.2
AT1G10230
Arabidopsis thaliana
3.0e-23
110.2
111
49.5
sya00G163700
Synedra acus
6.7e-23
109.0
116
44.8
pte442100
Paramecium tetraurelia
8.8e-23
108.6
118
49.2
AT2G03170
Arabidopsis thaliana
7.4e-22
105.5
192
33.3
Pp3c1_36090
Physcomitrella patens
1.3e-21
104.8
193
34.2
AT3G21860
Arabidopsis thaliana
2.8e-21
103.6
113
45.1
WBGene00004810
Caenorhabditis elegans
1.1e-20
101.7
117
42.7
ccr168540
Chondrus crispus
1.4e-20
101.3
112
42.0
AT3G21830
Arabidopsis thaliana
1.8e-20
100.9
114
45.6
tps30630
Thalassiosira pseudonana
4.1e-20
99.8
116
45.7
tho285880
Thalassiosira oceanica
9.1e-20
98.6
66
65.2
FBgn0026175
Drosophila melanogaster
4.5e-19
96.3
99
46.5
FBgn0026174
Drosophila melanogaster
5.9e-19
95.9
99
45.5
WBGene00004814
Caenorhabditis elegans
7.7e-19
95.5
114
44.7
fso53850
Fistulifera solaris
7.7e-19
95.5
191
41.4
AT3G25650
Arabidopsis thaliana
1.3e-18
94.7
200
31.0
sya00G259410
Synedra acus
1.3e-18
94.7
191
33.0
tho234600
Thalassiosira oceanica
1.3e-18
94.7
114
43.0
WBGene00004811
Caenorhabditis elegans
2.2e-18
94.0
99
44.4
fso129490
Fistulifera solaris
2.2e-18
94.0
191
40.8
WBGene00004815
Caenorhabditis elegans
3.8e-18
93.2
114
43.9
gene16519
Fragilariopsis cylindrus
5.0e-18
92.8
115
39.1
ps00G86310
Pseudo-nitzschia multiseries
5.0e-18
92.8
116
39.7
WBGene00004816
Caenorhabditis elegans
6.5e-18
92.4
107
44.9
PSNMU-V1.4_AUG-EV-PASAV3_0044610
Pseudo-nitzschia multistriata
6.5e-18
92.4
119
41.2
AT2G03160
Arabidopsis thaliana
1.1e-17
91.7
228
28.9
AT3G60020
Arabidopsis thaliana
1.5e-17
91.3
196
29.6
AT2G03190
Arabidopsis thaliana
9.4e-17
88.6
126
40.5
tho573320
Thalassiosira oceanica
1.2e-16
88.2
92
45.7
WBGene00004813
Caenorhabditis elegans
2.7e-16
87.0
105
41.0
ptri227610
Phaeodactylum tricornutum
1.8e-15
84.3
118
37.3
Sro696_g188910
Seminavis robusta
1.8e-15
84.3
193
33.2
WBGene00004820
Caenorhabditis elegans
3.0e-15
83.6
105
40.0
WBGene00004818
Caenorhabditis elegans
4.0e-15
83.2
105
40.0
sya00G84090
Synedra acus
5.2e-15
82.8
104
43.3
sya00G84160
Synedra acus
5.2e-15
82.8
104
43.3
FBgn0031074
Drosophila melanogaster
6.8e-15
82.4
187
31.0
Ec-09_004320
Ectocarpus siliculosus
6.8e-15
82.4
117
37.6
WBGene00004819
Caenorhabditis elegans
1.3e-13
78.2
105
39.0
Sro696_g188900
Seminavis robusta
1.3e-13
78.2
99
41.4
Sro119_g058220
Seminavis robusta
4.1e-12
73.2
118
37.3
tps109320
Thalassiosira pseudonana
4.1e-12
73.2
116
37.1
CC00G117540
Cyclotella cryptica
5.4e-12
72.8
116
36.2
tho121280
Thalassiosira oceanica
5.4e-12
72.8
119
36.1
Sro1805_g298840
Seminavis robusta
7.0e-12
72.4
112
36.6
AT2G20160
Arabidopsis thaliana
9.1e-12
72.0
112
34.8
CC00G46080
Cyclotella cryptica
9.1e-12
72.0
74
45.9
WBGene00004826
Caenorhabditis elegans
2.0e-11
70.9
99
36.4
sya00G163740
Synedra acus
2.7e-11
70.5
58
53.4
tps47390
Thalassiosira pseudonana
3.5e-11
70.1
122
34.4
WBGene00004812
Caenorhabditis elegans
4.5e-11
69.7
110
31.8
CC00G186010
Cyclotella cryptica
7.7e-11
68.9
117
34.2
fso53420
Fistulifera solaris
1.3e-10
68.2
113
34.5
WBGene00004821
Caenorhabditis elegans
6.5e-10
65.9
114
35.1
tho179600
Thalassiosira oceanica
6.5e-10
65.9
85
42.4
WBGene00004822
Caenorhabditis elegans
3.2e-09
63.5
107
34.6
Pp3c5_3410
Physcomitrella patens
5.5e-09
62.8
74
44.6
ps00G40280
Pseudo-nitzschia multiseries
5.5e-09
62.8
120
31.7
sya00G84150
Synedra acus
5.5e-09
62.8
102
32.4
WBGene00004823
Caenorhabditis elegans
7.2e-09
62.4
95
33.7
fso53410
Fistulifera solaris
4.7e-08
59.7
196
22.4
fso129040
Fistulifera solaris
4.7e-08
59.7
196
21.4
AT2G45950
Arabidopsis thaliana
1.8e-07
57.8
64
39.1
AT3G61415
Arabidopsis thaliana
1.8e-07
57.8
63
39.7
gene6053
Fragilariopsis cylindrus
1.8e-07
57.8
119
28.6
sya00G218460
Synedra acus
1.8e-07
57.8
117
30.8
Pp3c9_25390
Physcomitrella patens
3.0e-07
57.0
101
31.7
ccr128460
Chondrus crispus
6.8e-07
55.8
110
24.5
sya00G163660
Synedra acus
1.2e-06
55.1
77
36.4
WBGene00004825
Caenorhabditis elegans
4.4e-06
53.1
99
33.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (7 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (6 genes)
Caenorhabditis elegans (18 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (19 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (6 genes)
Synedra acus (10 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing