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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YDR245W
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YDR245W
Saccharomyces cerevisiae strain S288C
8.3e-238
823.9
394
100.0
SPAC637.06
Schizosaccharomyces pombe
2.4e-83
310.8
272
49.3
SPBC1289.13c
Schizosaccharomyces pombe
1.1e-29
132.5
244
32.0
SPCC736.04c
Schizosaccharomyces pombe
4.4e-29
130.6
243
29.2
SPAC22E12.06c
Schizosaccharomyces pombe
4.4e-21
104.0
269
29.4
SPAC5H10.11
Schizosaccharomyces pombe
3.7e-20
100.9
195
34.4
SPAC5H10.13c
Schizosaccharomyces pombe
4.8e-20
100.5
230
30.0
SPBC8D2.17
Schizosaccharomyces pombe
3.2e-16
87.8
258
26.4
ptri174010
Phaeodactylum tricornutum
6.8e-14
80.1
242
26.0
ptri173870
Phaeodactylum tricornutum
2.8e-12
74.7
187
26.7
Pp3c7_7810
Physcomitrella patens
4.1e-11
70.9
212
23.1
sya00G171820
Synedra acus
1.6e-10
68.9
177
26.6
Ec-20_002810
Ectocarpus siliculosus
2.0e-10
68.6
203
29.1
fso156270
Fistulifera solaris
3.5e-10
67.8
277
23.8
fso87190
Fistulifera solaris
7.7e-10
66.6
274
22.3
Pp3c11_20260
Physcomitrella patens
1.3e-09
65.9
143
24.5
sya00G195120
Synedra acus
6.6e-09
63.5
203
25.1
tps223060
Thalassiosira pseudonana
1.1e-08
62.8
188
25.0
ptri49410
Phaeodactylum tricornutum
1.5e-08
62.4
202
24.3
Pp3c3_11340
Physcomitrella patens
3.3e-08
61.2
170
24.7
ptri173890
Phaeodactylum tricornutum
4.3e-08
60.8
244
21.3
fso20200
Fistulifera solaris
5.6e-08
60.5
200
23.0
Pp3c22_14660
Physcomitrella patens
2.1e-07
58.5
137
28.5
Pp3c4_21250
Physcomitrella patens
2.1e-07
58.5
170
24.1
Naga_100033g40
Nannochloropsis gaditana
2.8e-07
58.2
185
25.4
Pp3c12_9050
Physcomitrella patens
2.8e-07
58.2
170
24.7
fso42470
Fistulifera solaris
8.0e-07
56.6
200
22.0
Pp3c13_8600
Physcomitrella patens
1.4e-06
55.8
138
27.5
Pp3c23_380
Physcomitrella patens
1.4e-06
55.8
139
29.5
Pp3c19_13350
Physcomitrella patens
1.8e-06
55.5
137
27.7
Pp3c18_6550
Physcomitrella patens
1.8e-06
55.5
137
24.8
Pp3c21_22300
Physcomitrella patens
2.3e-06
55.1
138
28.3
Pp3c18_1170
Physcomitrella patens
3.0e-06
54.7
138
28.3
Pp3c12_23460
Physcomitrella patens
4.0e-06
54.3
138
25.4
Pp3c18_430
Physcomitrella patens
4.0e-06
54.3
171
22.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (7 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (2 genes)
Physcomitrella patens (14 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing