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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YDL201W
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YDL201W
Saccharomyces cerevisiae strain S288C
2.1e-166
586.3
287
100.0
WBGene00012205
Caenorhabditis elegans
8.5e-83
308.5
239
60.7
SPCPB16A4.04c
Schizosaccharomyces pombe
1.1e-82
308.1
278
56.8
ENSG00000037897
Homo sapiens
3.1e-77
290.0
257
57.2
FBgn0025629
Drosophila melanogaster
8.5e-75
282.0
234
57.3
Pp3c24_9600
Physcomitrella patens
3.0e-72
273.5
240
54.2
AT5G24840
Arabidopsis thaliana
7.5e-71
268.9
247
52.6
gene14752
Fragilariopsis cylindrus
3.6e-65
250.0
239
52.3
ptri108660
Phaeodactylum tricornutum
4.9e-62
239.6
251
49.4
Ec-07_001780
Ectocarpus siliculosus
8.3e-62
238.8
236
50.8
PSNMU-V1.4_AUG-EV-PASAV3_0090000
Pseudo-nitzschia multistriata
1.8e-61
237.7
255
49.4
ps00G68630
Pseudo-nitzschia multiseries
4.1e-61
236.5
237
51.1
sya00G37200
Synedra acus
2.3e-59
230.7
247
46.2
Sro599_g173150
Seminavis robusta
8.6e-59
228.8
244
46.3
Naga_100004g165
Nannochloropsis gaditana
1.9e-58
227.6
250
47.6
sya00G33600
Synedra acus
9.5e-58
225.3
274
44.2
fso93460
Fistulifera solaris
1.6e-57
224.6
242
51.7
Cre07.g314550
Chlamydomonas reinhardtii
2.8e-57
223.8
260
46.2
CC00G120820
Cyclotella cryptica
2.3e-56
220.7
280
43.9
fso158930
Fistulifera solaris
3.1e-56
220.3
249
49.0
tho328040
Thalassiosira oceanica
2.6e-55
217.2
248
46.8
AA0002G00460
Aureococcus anophagefferens
7.0e-53
209.1
242
45.5
tps168210
Thalassiosira pseudonana
1.7e-51
204.5
204
51.5
pte459190
Paramecium tetraurelia
5.0e-51
203.0
267
40.8
pte524750
Paramecium tetraurelia
6.6e-51
202.6
275
40.4
emh542230
Emiliania huxleyi
3.6e-49
196.8
246
40.2
emh129170
Emiliania huxleyi
3.6e-49
196.8
246
40.2
ccr18680
Chondrus crispus
2.1e-44
181.0
184
47.8
gsu47000
Galdieria sulphuraria
5.1e-43
176.4
223
39.9
CM20G04070
Cyanidioschyzon merolae
1.3e-35
151.8
288
32.6
sya00G204080
Synedra acus
1.0e-11
72.4
212
29.2
gene13748
Fragilariopsis cylindrus
9.6e-10
65.9
245
26.9
PSNMU-V1.4_AUG-EV-PASAV3_0118410
Pseudo-nitzschia multistriata
1.3e-09
65.5
289
24.9
CM17G01290
Cyanidioschyzon merolae
4.8e-09
63.5
182
28.0
tps141170
Thalassiosira pseudonana
6.9e-08
59.7
249
26.1
Ec-08_005590
Ectocarpus siliculosus
2.6e-07
57.8
130
28.5
Pp3c19_7240
Physcomitrella patens
7.6e-07
56.2
191
27.7
gsu57460
Galdieria sulphuraria
1.0e-06
55.8
170
27.6
Pp3c18_9830
Physcomitrella patens
2.2e-06
54.7
144
28.5
AT5G17660
Arabidopsis thaliana
3.8e-06
53.9
211
24.2
tho12020
Thalassiosira oceanica
4.9e-06
53.5
210
26.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing