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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YBR088C
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YBR088C
Saccharomyces cerevisiae strain S288C
2.1e-141
503.1
259
100.0
SPBC16D10.09
Schizosaccharomyces pombe
2.1e-64
247.3
258
44.6
CM19G01010
Cyanidioschyzon merolae
1.9e-57
224.2
259
44.4
AT1G07370
Arabidopsis thaliana
3.3e-57
223.4
259
40.2
AT2G29570
Arabidopsis thaliana
9.5e-57
221.9
259
39.8
sya00G100440
Synedra acus
8.0e-56
218.8
260
41.5
tps107290
Thalassiosira pseudonana
1.4e-55
218.0
259
40.2
Pp3c12_18160
Physcomitrella patens
6.8e-55
215.7
259
39.4
gsu62450
Galdieria sulphuraria
4.4e-54
213.0
255
40.4
Sro844_g209890
Seminavis robusta
5.4e-52
206.1
261
39.8
Sro57_g033090
Seminavis robusta
5.4e-52
206.1
261
39.8
FBgn0005655
Drosophila melanogaster
1.2e-51
204.9
259
35.9
WBGene00003955
Caenorhabditis elegans
2.0e-51
204.1
260
40.4
Naga_100145g17
Nannochloropsis gaditana
2.0e-51
204.1
259
39.0
Ec-01_002530
Ectocarpus siliculosus
1.3e-50
201.4
259
36.7
ENSG00000132646
Homo sapiens
3.9e-50
199.9
259
35.5
AA0007G04520
Aureococcus anophagefferens
1.1e-49
198.4
263
36.9
Cre12.g515850
Chlamydomonas reinhardtii
1.1e-49
198.4
259
36.3
ptri80080
Phaeodactylum tricornutum
1.5e-49
198.0
258
37.6
FBgn0032813
Drosophila melanogaster
1.2e-48
194.9
259
36.3
pte305140
Paramecium tetraurelia
3.6e-48
193.4
260
38.1
CC00G114570
Cyclotella cryptica
1.0e-47
191.8
237
38.4
pte190860
Paramecium tetraurelia
1.0e-47
191.8
260
37.7
tho240980
Thalassiosira oceanica
1.0e-47
191.8
305
32.8
fso165740
Fistulifera solaris
4.0e-47
189.9
259
35.1
pte718810
Paramecium tetraurelia
4.0e-47
189.9
260
37.7
fso61540
Fistulifera solaris
6.8e-47
189.1
259
35.1
ccr173600
Chondrus crispus
3.4e-46
186.8
262
35.9
emh268060
Emiliania huxleyi
7.5e-46
185.7
214
43.0
Pp3c4_11630
Physcomitrella patens
2.2e-45
184.1
220
39.1
PSNMU-V1.4_AUG-EV-PASAV3_0051230
Pseudo-nitzschia multistriata
3.2e-44
180.3
259
36.7
gene20906
Fragilariopsis cylindrus
1.3e-42
174.9
259
35.1
gene3443
Fragilariopsis cylindrus
1.3e-42
174.9
259
35.1
ps00G195000
Pseudo-nitzschia multiseries
1.3e-42
174.9
259
35.9
Ec-06_005530
Ectocarpus siliculosus
6.6e-18
92.8
243
26.7
pte598460
Paramecium tetraurelia
1.5e-14
81.6
262
27.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing