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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00020235
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00020235
Caenorhabditis elegans
0.0e+00
3187.1
1623
100.0
gsu117980
Galdieria sulphuraria
2.0e-40
170.2
1429
20.9
FBgn0035689
Drosophila melanogaster
4.9e-34
149.1
564
27.0
ENSG00000146414
Homo sapiens
7.8e-32
141.7
1244
21.8
AT2G40770
Arabidopsis thaliana
4.4e-27
125.9
598
24.1
CM12G02870
Cyanidioschyzon merolae
5.8e-27
125.6
572
23.4
ccr183280
Chondrus crispus
4.6e-24
115.9
409
26.2
Pp3c18_13500
Physcomitrella patens
8.7e-23
111.7
570
21.2
ps00G16830
Pseudo-nitzschia multiseries
5.6e-22
109.0
575
24.2
pte659520
Paramecium tetraurelia
1.5e-19
100.9
439
23.0
AT5G05130
Arabidopsis thaliana
2.6e-19
100.1
452
25.2
WBGene00020685
Caenorhabditis elegans
4.4e-19
99.4
58
82.8
Pp3c6_21140
Physcomitrella patens
2.9e-18
96.7
231
29.9
gsu135440
Galdieria sulphuraria
3.8e-18
96.3
362
22.1
pte416570
Paramecium tetraurelia
6.4e-18
95.5
603
23.7
Naga_100079g10
Nannochloropsis gaditana
8.4e-18
95.1
452
25.0
tho98120
Thalassiosira oceanica
1.4e-17
94.4
434
25.8
SPAC144.05
Schizosaccharomyces pombe
7.1e-17
92.0
230
29.1
fso72150
Fistulifera solaris
2.7e-16
90.1
599
20.9
ptri153740
Phaeodactylum tricornutum
4.6e-16
89.4
679
20.0
AT5G22750
Arabidopsis thaliana
1.0e-15
88.2
409
24.0
CM18G02590
Cyanidioschyzon merolae
1.0e-15
88.2
438
21.9
fso159700
Fistulifera solaris
1.3e-15
87.8
593
22.4
emh401240
Emiliania huxleyi
2.3e-15
87.0
155
31.0
Pp3c24_8230
Physcomitrella patens
5.1e-15
85.9
475
23.2
ENSG00000071794
Homo sapiens
8.7e-15
85.1
586
22.7
YLR247C
Saccharomyces cerevisiae strain S288C
1.1e-14
84.7
471
23.6
AT1G11100
Arabidopsis thaliana
2.5e-14
83.6
404
23.8
AT3G20010
Arabidopsis thaliana
3.3e-14
83.2
325
25.2
YLR032W
Saccharomyces cerevisiae strain S288C
7.3e-14
82.0
528
23.1
WBGene00020742
Caenorhabditis elegans
9.6e-14
81.6
277
25.6
Ec-07_006640
Ectocarpus siliculosus
9.6e-14
81.6
248
27.8
Ec-12_001510
Ectocarpus siliculosus
9.6e-14
81.6
457
23.2
SPBC582.10c
Schizosaccharomyces pombe
2.8e-13
80.1
269
28.3
AT3G16600
Arabidopsis thaliana
3.6e-13
79.7
225
26.7
Pp3c5_4990
Physcomitrella patens
3.6e-13
79.7
473
22.6
Pp3c5_5006
Physcomitrella patens
3.6e-13
79.7
473
22.6
YBR114W
Saccharomyces cerevisiae strain S288C
4.8e-13
79.3
271
24.0
ccr184940
Chondrus crispus
1.1e-12
78.2
282
25.9
Pp3c18_11770
Physcomitrella patens
1.1e-12
78.2
326
23.0
pte264830
Paramecium tetraurelia
1.4e-12
77.8
304
25.3
SPAC17A2.12
Schizosaccharomyces pombe
2.4e-12
77.0
250
25.2
WBGene00010061
Caenorhabditis elegans
3.1e-12
76.6
259
24.3
pte315540
Paramecium tetraurelia
4.0e-12
76.3
304
26.0
Pp3c21_12900
Physcomitrella patens
1.2e-11
74.7
328
24.1
AT5G43530
Arabidopsis thaliana
2.6e-11
73.6
262
23.7
AA0003G02210
Aureococcus anophagefferens
3.4e-11
73.2
162
29.0
gene14651
Fragilariopsis cylindrus
3.4e-11
73.2
210
26.7
AT1G61140
Arabidopsis thaliana
4.5e-11
72.8
405
22.7
AT1G02670
Arabidopsis thaliana
9.9e-11
71.6
172
29.1
Cre13.g603400
Chlamydomonas reinhardtii
9.9e-11
71.6
120
29.2
tps162860
Thalassiosira pseudonana
9.9e-11
71.6
378
24.3
ccr67660
Chondrus crispus
1.3e-10
71.2
317
24.6
CC00G22090
Cyclotella cryptica
1.3e-10
71.2
293
25.9
pte69860
Paramecium tetraurelia
1.3e-10
71.2
282
25.2
AT1G50410
Arabidopsis thaliana
1.7e-10
70.9
415
22.2
Cre14.g614400
Chlamydomonas reinhardtii
3.8e-10
69.7
159
25.8
gene1590
Fragilariopsis cylindrus
3.8e-10
69.7
321
24.6
SPAC13G6.01c
Schizosaccharomyces pombe
6.4e-10
68.9
247
23.1
gsu128120
Galdieria sulphuraria
8.4e-10
68.6
313
24.0
ccr85500
Chondrus crispus
1.4e-09
67.8
406
24.6
Cre06.g304000
Chlamydomonas reinhardtii
1.4e-09
67.8
232
28.0
ptri137110
Phaeodactylum tricornutum
1.4e-09
67.8
208
27.9
Sro588_g171530
Seminavis robusta
2.4e-09
67.0
244
28.3
Naga_100072g6
Nannochloropsis gaditana
4.2e-09
66.2
371
25.3
ps00G189740
Pseudo-nitzschia multiseries
7.1e-09
65.5
176
25.6
tho170600
Thalassiosira oceanica
9.3e-09
65.1
167
28.7
Cre03.g210625
Chlamydomonas reinhardtii
1.2e-08
64.7
251
25.1
fso68980
Fistulifera solaris
1.2e-08
64.7
206
23.3
fso197490
Fistulifera solaris
1.2e-08
64.7
206
23.3
pte230620
Paramecium tetraurelia
1.2e-08
64.7
247
25.1
SPBC23E6.02
Schizosaccharomyces pombe
1.2e-08
64.7
152
28.9
FBgn0037531
Drosophila melanogaster
1.6e-08
64.3
497
21.1
Cre10.g455750
Chlamydomonas reinhardtii
2.7e-08
63.5
262
25.2
tho98380
Thalassiosira oceanica
2.7e-08
63.5
409
21.8
CC00G205610
Cyclotella cryptica
3.5e-08
63.2
182
24.7
PSNMU-V1.4_AUG-EV-PASAV3_0033860
Pseudo-nitzschia multistriata
3.5e-08
63.2
266
24.1
Ec-14_005810
Ectocarpus siliculosus
4.6e-08
62.8
253
26.1
gene18420
Fragilariopsis cylindrus
7.9e-08
62.0
235
25.1
Sro243_g097000
Seminavis robusta
1.0e-07
61.6
129
30.2
gene2088
Fragilariopsis cylindrus
1.3e-07
61.2
74
37.8
PSNMU-V1.4_AUG-EV-PASAV3_0112530
Pseudo-nitzschia multistriata
1.3e-07
61.2
250
24.4
ccr74920
Chondrus crispus
1.8e-07
60.8
239
25.5
CM13G02450
Cyanidioschyzon merolae
1.8e-07
60.8
286
28.7
CC00G162030
Cyclotella cryptica
1.8e-07
60.8
288
23.6
CC00G190570
Cyclotella cryptica
1.8e-07
60.8
288
23.6
Sro617_g176140
Seminavis robusta
1.8e-07
60.8
1289
18.8
gene19056
Fragilariopsis cylindrus
2.3e-07
60.5
85
32.9
emh349660
Emiliania huxleyi
5.1e-07
59.3
236
27.1
gsu34210
Galdieria sulphuraria
6.7e-07
58.9
224
24.6
ENSG00000116830
Homo sapiens
6.7e-07
58.9
108
32.4
Sro298_g110990
Seminavis robusta
6.7e-07
58.9
275
21.8
PSNMU-V1.4_AUG-EV-PASAV3_0124070
Pseudo-nitzschia multistriata
1.1e-06
58.2
269
24.9
ptri152600
Phaeodactylum tricornutum
1.5e-06
57.8
286
24.8
AA0002G01660
Aureococcus anophagefferens
2.5e-06
57.0
299
24.7
Ec-23_001670
Ectocarpus siliculosus
2.5e-06
57.0
153
27.5
AT2G21450
Arabidopsis thaliana
3.3e-06
56.6
99
32.3
WBGene00000803
Caenorhabditis elegans
3.3e-06
56.6
117
33.3
ptri112720
Phaeodactylum tricornutum
4.3e-06
56.2
104
33.7
SPAC15A10.03c
Schizosaccharomyces pombe
5.6e-06
55.8
112
27.7
gene17830
Fragilariopsis cylindrus
7.4e-06
55.5
62
37.1
YGL150C
Saccharomyces cerevisiae strain S288C
7.4e-06
55.5
81
34.6
Sro264_g102660
Seminavis robusta
7.4e-06
55.5
256
23.4
Sro1370_g266980
Seminavis robusta
7.4e-06
55.5
152
26.3
sya00G223750
Synedra acus
7.4e-06
55.5
229
21.8
AT3G24340
Arabidopsis thaliana
9.6e-06
55.1
58
44.8
emh750750
Emiliania huxleyi
9.6e-06
55.1
141
28.4
emh145650
Emiliania huxleyi
9.6e-06
55.1
78
37.2
emh101890
Emiliania huxleyi
9.6e-06
55.1
78
37.2
YJR035W
Saccharomyces cerevisiae strain S288C
9.6e-06
55.1
131
32.1
YOR191W
Saccharomyces cerevisiae strain S288C
9.6e-06
55.1
238
21.4
tho124500
Thalassiosira oceanica
9.6e-06
55.1
87
36.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (6 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (6 genes)
Schizosaccharomyces pombe (6 genes)
Arabidopsis thaliana (12 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (6 genes)
Synedra acus (1 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing