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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00020082
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00020082
Caenorhabditis elegans
0.0e+00
1552.0
771
100.0
WBGene00007954
Caenorhabditis elegans
1.0e-138
495.7
752
37.1
ENSG00000086205
Homo sapiens
2.4e-108
394.8
715
35.2
ENSG00000077616
Homo sapiens
7.8e-107
389.8
727
35.1
WBGene00044121
Caenorhabditis elegans
9.0e-95
349.7
740
31.2
ENSG00000168060
Homo sapiens
7.9e-91
336.7
790
29.5
Pp3c24_6510
Physcomitrella patens
8.7e-90
333.2
684
33.3
Pp3c8_14530
Physcomitrella patens
4.5e-86
320.9
543
36.1
Pp3c8_14531
Physcomitrella patens
4.5e-86
320.9
543
36.1
Pp3c24_6511
Physcomitrella patens
1.1e-84
316.2
594
35.4
AT5G19740
Arabidopsis thaliana
9.3e-84
313.2
679
32.7
Sro40_g024630
Seminavis robusta
6.3e-72
273.9
738
30.2
AT3G54720
Arabidopsis thaliana
2.0e-70
268.9
660
29.2
Ec-27_000030
Ectocarpus siliculosus
7.6e-70
266.9
695
30.2
Naga_100038g30
Nannochloropsis gaditana
2.7e-67
258.5
682
29.5
CM20G00780
Cyanidioschyzon merolae
3.4e-62
241.5
695
30.1
ENSG00000106327
Homo sapiens
2.3e-58
228.8
654
27.1
emh270850
Emiliania huxleyi
3.6e-51
204.9
344
37.2
gene19371
Fragilariopsis cylindrus
3.8e-45
184.9
510
28.0
SPBC354.09c
Schizosaccharomyces pombe
6.7e-42
174.1
713
24.5
AT4G07670
Arabidopsis thaliana
2.6e-41
172.2
300
36.7
ENSG00000177694
Homo sapiens
5.7e-41
171.0
698
24.4
ENSG00000072274
Homo sapiens
2.9e-37
158.7
657
24.4
YJR126C
Saccharomyces cerevisiae strain S288C
1.5e-33
146.4
797
23.5
YOR256C
Saccharomyces cerevisiae strain S288C
7.5e-17
90.9
382
23.0
sya00G160400
Synedra acus
2.3e-10
69.3
86
41.9
pte465680
Paramecium tetraurelia
7.5e-09
64.3
97
33.0
pte650890
Paramecium tetraurelia
2.2e-08
62.8
97
32.0
Sro147_g067780
Seminavis robusta
1.9e-07
59.7
209
26.3
pte155240
Paramecium tetraurelia
4.6e-06
55.1
76
38.2
sya00G94910
Synedra acus
4.6e-06
55.1
307
24.1
pte02030
Paramecium tetraurelia
7.8e-06
54.3
74
36.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (6 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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