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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00012230
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00012230
Caenorhabditis elegans
2.8e-307
1055.4
583
100.0
ENSG00000105298
Homo sapiens
6.9e-88
326.6
590
38.8
FBgn0031114
Drosophila melanogaster
7.2e-85
316.6
612
36.1
Pp3c27_420
Physcomitrella patens
1.1e-72
276.2
612
34.0
ptri106020
Phaeodactylum tricornutum
1.0e-62
243.0
616
30.2
AT1G03910
Arabidopsis thaliana
1.3e-62
242.7
642
30.4
CC00G14580
Cyclotella cryptica
5.2e-59
230.7
622
28.0
Sro219_g090590
Seminavis robusta
9.8e-58
226.5
622
28.5
fso16790
Fistulifera solaris
1.3e-57
226.1
616
28.1
sya00G148890
Synedra acus
4.1e-56
221.1
616
27.4
tps50520
Thalassiosira pseudonana
2.9e-54
214.9
651
27.6
fso118230
Fistulifera solaris
8.6e-54
213.4
612
28.1
Ec-21_001680
Ectocarpus siliculosus
1.5e-53
212.6
597
28.1
Naga_100560g4
Nannochloropsis gaditana
1.6e-52
209.1
137
63.5
gsu20970
Galdieria sulphuraria
2.1e-52
208.8
587
28.1
tho360720
Thalassiosira oceanica
5.2e-51
204.1
619
27.9
ccr123020
Chondrus crispus
6.8e-51
203.8
197
48.7
ps00G183420
Pseudo-nitzschia multiseries
2.2e-49
198.7
522
29.3
PSNMU-V1.4_AUG-EV-PASAV3_0099950
Pseudo-nitzschia multistriata
1.8e-48
195.7
607
25.9
gene3509
Fragilariopsis cylindrus
1.1e-45
186.4
151
54.3
gene17567
Fragilariopsis cylindrus
1.1e-45
186.4
151
54.3
Cre09.g398650
Chlamydomonas reinhardtii
1.6e-44
182.6
154
55.2
AA0001G04590
Aureococcus anophagefferens
1.4e-43
179.5
126
60.3
pte576560
Paramecium tetraurelia
2.0e-42
175.6
585
24.4
emh722480
Emiliania huxleyi
3.0e-38
161.8
123
60.2
emh524960
Emiliania huxleyi
2.1e-28
129.0
536
25.0
SPBC2F12.12c
Schizosaccharomyces pombe
1.1e-27
126.7
550
25.1
emh524980
Emiliania huxleyi
8.7e-14
80.5
47
68.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing