Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00009164
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00009164
Caenorhabditis elegans
0.0e+00
1128.6
565
100.0
ENSG00000159461
Homo sapiens
6.5e-34
147.1
590
23.6
Pp3c16_2890
Physcomitrella patens
7.2e-09
63.9
229
23.6
AT1G65040
Arabidopsis thaliana
2.7e-08
62.0
126
27.0
AT3G16090
Arabidopsis thaliana
8.0e-08
60.5
331
19.9
AT5G59550
Arabidopsis thaliana
8.0e-08
60.5
103
34.0
CC00G72160
Cyclotella cryptica
1.4e-07
59.7
88
33.0
emh266500
Emiliania huxleyi
2.3e-07
58.9
75
36.0
tps27790
Thalassiosira pseudonana
2.3e-07
58.9
88
30.7
gsu122750
Galdieria sulphuraria
4.0e-07
58.2
323
20.1
ccr128240
Chondrus crispus
5.2e-07
57.8
204
23.5
Naga_100011g51
Nannochloropsis gaditana
5.2e-07
57.8
175
27.4
Pp3c3_13100
Physcomitrella patens
8.8e-07
57.0
62
38.7
AT2G40830
Arabidopsis thaliana
2.0e-06
55.8
63
38.1
pte412800
Paramecium tetraurelia
2.0e-06
55.8
67
38.8
Ec-27_004490
Ectocarpus siliculosus
3.3e-06
55.1
60
36.7
AT3G56580
Arabidopsis thaliana
5.7e-06
54.3
88
33.0
Ec-08_003750
Ectocarpus siliculosus
5.7e-06
54.3
90
30.0
AT3G10815
Arabidopsis thaliana
7.5e-06
53.9
59
35.6
Cre08.g381900
Chlamydomonas reinhardtii
7.5e-06
53.9
59
42.4
Pp3c13_19370
Physcomitrella patens
7.5e-06
53.9
55
40.0
AT2G44330
Arabidopsis thaliana
9.7e-06
53.5
65
40.0
Pp3c13_21890
Physcomitrella patens
9.7e-06
53.5
50
42.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing