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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00004049
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00004049
Caenorhabditis elegans
0.0e+00
1843.9
946
100.0
ENSG00000143799
Homo sapiens
3.5e-125
451.1
1080
31.9
FBgn0010247
Drosophila melanogaster
1.6e-106
389.0
1066
28.0
AT2G31320
Arabidopsis thaliana
4.2e-102
374.4
1035
29.8
Pp3c8_17220
Physcomitrella patens
4.9e-95
350.9
1060
30.2
AT4G02390
Arabidopsis thaliana
2.4e-81
305.4
490
36.9
Pp3c22_13240
Physcomitrella patens
1.4e-78
296.2
527
35.5
ENSG00000129484
Homo sapiens
4.6e-77
291.2
493
36.9
pte68730
Paramecium tetraurelia
3.6e-69
265.0
480
36.0
pte139850
Paramecium tetraurelia
5.1e-68
261.2
488
34.6
Sro1616_g286270
Seminavis robusta
6.3e-66
254.2
765
27.7
emh663610
Emiliania huxleyi
1.2e-64
250.0
508
35.4
pte237100
Paramecium tetraurelia
1.2e-64
250.0
444
35.6
pte591900
Paramecium tetraurelia
2.9e-63
245.4
500
33.4
pte427070
Paramecium tetraurelia
2.5e-62
242.3
446
35.2
emh105980
Emiliania huxleyi
1.2e-61
240.0
499
35.3
ENSG00000041880
Homo sapiens
2.0e-59
232.6
491
33.8
Sro1169_g248640
Seminavis robusta
6.3e-58
227.6
559
29.9
emh410120
Emiliania huxleyi
6.5e-55
217.6
528
32.6
pte130650
Paramecium tetraurelia
9.8e-51
203.8
551
29.0
pte447380
Paramecium tetraurelia
3.7e-50
201.8
514
29.0
Sro633_g178800
Seminavis robusta
4.1e-49
198.4
475
30.9
pte409990
Paramecium tetraurelia
2.7e-48
195.7
511
29.0
pte587580
Paramecium tetraurelia
9.4e-46
187.2
549
27.3
pte733580
Paramecium tetraurelia
2.2e-42
176.0
540
26.7
Ec-17_003060
Ectocarpus siliculosus
9.1e-41
170.6
498
27.9
ccr70840
Chondrus crispus
1.2e-40
170.2
505
26.5
Sro1047_g235110
Seminavis robusta
7.7e-40
167.5
460
29.8
emh53760
Emiliania huxleyi
5.9e-32
141.4
183
47.5
WBGene00004053
Caenorhabditis elegans
2.9e-31
139.0
491
25.7
Pp3c1_22640
Physcomitrella patens
5.2e-28
128.3
494
26.3
WBGene00004050
Caenorhabditis elegans
1.1e-25
120.6
547
25.4
pte768540
Paramecium tetraurelia
7.8e-24
114.4
538
23.0
AT5G22470
Arabidopsis thaliana
2.3e-23
112.8
520
25.4
pte417050
Paramecium tetraurelia
3.4e-19
99.0
231
29.4
ENSG00000102699
Homo sapiens
4.9e-18
95.1
421
25.4
Sro1589_g284370
Seminavis robusta
6.2e-13
78.2
251
25.5
AT3G14890
Arabidopsis thaliana
3.5e-08
62.4
191
25.1
ENSG00000005156
Homo sapiens
1.5e-06
57.0
192
24.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (12 genes)
Seminavis robusta (5 genes)
Synedra acus (0 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing