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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00001484
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00001484
Caenorhabditis elegans
2.6e-218
759.2
416
100.0
WBGene00011279
Caenorhabditis elegans
2.2e-31
138.3
189
46.6
FBgn0052062
Drosophila melanogaster
2.4e-30
134.8
135
55.6
ENSG00000100320
Homo sapiens
7.1e-30
133.3
84
75.0
ENSG00000277564
Homo sapiens
7.1e-30
133.3
84
75.0
ENSG00000167281
Homo sapiens
3.5e-29
131.0
129
57.4
ENSG00000078328
Homo sapiens
3.0e-28
127.9
240
42.5
WBGene00004984
Caenorhabditis elegans
7.6e-16
86.7
75
56.0
Pp3c24_17150
Physcomitrella patens
1.1e-11
72.8
94
37.2
sya00G117360
Synedra acus
5.3e-09
63.9
95
36.8
sya00G117390
Synedra acus
5.3e-09
63.9
95
36.8
gsu84990
Galdieria sulphuraria
1.5e-08
62.4
137
31.4
fso164540
Fistulifera solaris
3.4e-08
61.2
75
37.3
PSNMU-V1.4_AUG-EV-PASAV3_0093470
Pseudo-nitzschia multistriata
3.4e-08
61.2
77
41.6
gsu31230
Galdieria sulphuraria
7.7e-08
60.1
119
33.6
WBGene00003902
Caenorhabditis elegans
1.0e-07
59.7
81
35.8
ptri13010
Phaeodactylum tricornutum
1.3e-07
59.3
75
38.7
AT3G52380
Arabidopsis thaliana
1.7e-07
58.9
74
39.2
fso122440
Fistulifera solaris
1.7e-07
58.9
75
37.3
ps00G22050
Pseudo-nitzschia multiseries
1.7e-07
58.9
90
36.7
Sro737_g195080
Seminavis robusta
1.7e-07
58.9
72
43.1
gene4962
Fragilariopsis cylindrus
2.2e-07
58.5
77
36.4
Sro53_g031580
Seminavis robusta
2.2e-07
58.5
80
40.0
PSNMU-V1.4_AUG-EV-PASAV3_0097060
Pseudo-nitzschia multistriata
2.9e-07
58.2
75
37.3
Pp3c8_16740
Physcomitrella patens
2.9e-07
58.2
92
31.5
Sro979_g227190
Seminavis robusta
2.9e-07
58.2
75
41.3
gene14255
Fragilariopsis cylindrus
3.8e-07
57.8
75
37.3
fso154750
Fistulifera solaris
5.0e-07
57.4
89
37.1
fso187330
Fistulifera solaris
5.0e-07
57.4
89
36.0
ENSG00000136527
Homo sapiens
5.0e-07
57.4
99
34.3
Naga_100174g2
Nannochloropsis gaditana
8.5e-07
56.6
96
34.4
AT3G53460
Arabidopsis thaliana
1.1e-06
56.2
79
36.7
Pp3c11_26720
Physcomitrella patens
1.1e-06
56.2
223
30.0
sya00G170030
Synedra acus
1.1e-06
56.2
89
37.1
gsu80790
Galdieria sulphuraria
1.4e-06
55.8
92
39.1
AT3G52150
Arabidopsis thaliana
1.9e-06
55.5
86
32.6
AT5G50250
Arabidopsis thaliana
1.9e-06
55.5
108
32.4
Cre13.g602850
Chlamydomonas reinhardtii
1.9e-06
55.5
87
34.5
Pp3c4_6610
Physcomitrella patens
1.9e-06
55.5
77
39.0
ENSG00000152430
Homo sapiens
2.5e-06
55.1
111
27.9
Pp3c12_23410
Physcomitrella patens
2.5e-06
55.1
104
32.7
Pp3c1_6280
Physcomitrella patens
2.5e-06
55.1
119
37.0
ENSG00000164548
Homo sapiens
3.2e-06
54.7
105
32.4
Pp3c12_23420
Physcomitrella patens
3.2e-06
54.7
104
31.7
ps00G156190
Pseudo-nitzschia multiseries
3.2e-06
54.7
71
42.3
tho40720
Thalassiosira oceanica
3.2e-06
54.7
90
37.8
WBGene00004701
Caenorhabditis elegans
4.2e-06
54.3
80
35.0
FBgn0011640
Drosophila melanogaster
4.2e-06
54.3
117
27.4
emh211940
Emiliania huxleyi
4.2e-06
54.3
87
29.9
sya00G183900
Synedra acus
4.2e-06
54.3
96
33.3
AT1G73530
Arabidopsis thaliana
5.5e-06
53.9
87
32.2
AT2G37220
Arabidopsis thaliana
5.5e-06
53.9
79
35.4
Cre04.g213905
Chlamydomonas reinhardtii
5.5e-06
53.9
81
30.9
FBgn0031883
Drosophila melanogaster
5.5e-06
53.9
178
29.2
Pp3c19_7020
Physcomitrella patens
5.5e-06
53.9
75
40.0
ptri115700
Phaeodactylum tricornutum
5.5e-06
53.9
72
38.9
AT1G22760
Arabidopsis thaliana
7.2e-06
53.5
68
41.2
emh667360
Emiliania huxleyi
7.2e-06
53.5
73
37.0
ENSG00000099622
Homo sapiens
7.2e-06
53.5
76
34.2
Pp3c7_5120
Physcomitrella patens
7.2e-06
53.5
222
29.3
Pp3c7_5140
Physcomitrella patens
7.2e-06
53.5
222
29.3
AT1G71770
Arabidopsis thaliana
9.4e-06
53.1
68
39.7
AT3G16380
Arabidopsis thaliana
9.4e-06
53.1
74
37.8
FBgn0265298
Drosophila melanogaster
9.4e-06
53.1
100
34.0
Pp3c18_16140
Physcomitrella patens
9.4e-06
53.1
75
40.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (9 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing