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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00000386
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00000386
Caenorhabditis elegans
0.0e+00
1189.5
605
100.0
WBGene00000389
Caenorhabditis elegans
6.3e-35
150.6
189
42.9
WBGene00000387
Caenorhabditis elegans
1.0e-32
143.3
234
38.0
WBGene00000388
Caenorhabditis elegans
1.2e-30
136.3
177
39.0
ENSG00000164045
Homo sapiens
1.5e-25
119.4
172
36.0
ENSG00000101224
Homo sapiens
8.5e-24
113.6
222
36.0
ENSG00000158402
Homo sapiens
1.2e-22
109.8
174
33.9
FBgn0003525
Drosophila melanogaster
6.1e-22
107.5
191
31.4
FBgn0002673
Drosophila melanogaster
7.9e-22
107.1
247
30.0
SPAC24H6.05
Schizosaccharomyces pombe
9.7e-20
100.1
150
38.7
YMR036C
Saccharomyces cerevisiae strain S288C
1.8e-18
95.9
158
32.3
pte101840
Paramecium tetraurelia
2.7e-14
82.0
165
30.9
pte154730
Paramecium tetraurelia
6.1e-14
80.9
177
32.2
pte65810
Paramecium tetraurelia
2.4e-10
68.9
129
27.9
pte90970
Paramecium tetraurelia
4.1e-10
68.2
123
26.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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