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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00000292
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00000292
Caenorhabditis elegans
2.0e-164
579.7
283
100.0
FBgn0034577
Drosophila melanogaster
1.0e-80
301.6
283
55.5
ENSG00000116489
Homo sapiens
1.0e-80
301.6
283
55.5
ENSG00000198898
Homo sapiens
8.1e-78
292.0
284
53.2
AT3G05520
Arabidopsis thaliana
2.6e-31
137.5
293
27.3
YKL007W
Saccharomyces cerevisiae strain S288C
4.8e-30
133.3
282
29.8
ENSG00000177938
Homo sapiens
2.7e-28
127.5
275
28.7
SPAC12B10.07
Schizosaccharomyces pombe
8.0e-25
115.9
265
29.8
AA0030G00900
Aureococcus anophagefferens
4.0e-24
113.6
276
30.1
emh328210
Emiliania huxleyi
6.8e-24
112.8
307
27.0
AA0001G01170
Aureococcus anophagefferens
2.6e-23
110.9
309
26.5
Ec-23_003060
Ectocarpus siliculosus
3.4e-23
110.5
281
27.4
Pp3c10_25170
Physcomitrella patens
1.6e-20
101.7
231
29.4
pte560950
Paramecium tetraurelia
1.7e-19
98.2
269
27.9
pte635690
Paramecium tetraurelia
1.1e-18
95.5
272
27.2
Pp3c20_23130
Physcomitrella patens
1.1e-13
79.0
180
26.7
Naga_100016g39
Nannochloropsis gaditana
4.6e-12
73.6
165
30.3
sya00G84100
Synedra acus
4.4e-07
57.0
158
27.8
sya00G84180
Synedra acus
4.4e-07
57.0
158
27.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (0 genes)
Synedra acus (2 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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