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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
WBGene00000275
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
WBGene00000275
Caenorhabditis elegans
0.0e+00
1938.7
988
100.0
ENSG00000169679
Homo sapiens
1.0e-34
150.6
464
25.9
FBgn0031696
Drosophila melanogaster
3.8e-29
132.1
247
33.2
FBgn0263855
Drosophila melanogaster
4.2e-28
128.6
301
29.2
Pp3c20_12130
Physcomitrella patens
3.3e-25
119.0
429
22.8
YGR188C
Saccharomyces cerevisiae strain S288C
2.1e-24
116.3
324
26.9
AT2G20635
Arabidopsis thaliana
1.3e-21
107.1
339
23.6
SPCC1322.12c
Schizosaccharomyces pombe
3.2e-20
102.4
246
28.0
Ec-01_003570
Ectocarpus siliculosus
2.7e-19
99.4
319
23.2
WBGene00009300
Caenorhabditis elegans
1.0e-18
97.4
146
34.9
WBGene00007773
Caenorhabditis elegans
1.3e-18
97.1
192
32.8
WBGene00009302
Caenorhabditis elegans
2.5e-17
92.8
142
33.1
pte592760
Paramecium tetraurelia
1.6e-11
73.6
233
27.0
pte712260
Paramecium tetraurelia
4.6e-11
72.0
218
26.6
fso24820
Fistulifera solaris
3.0e-10
69.3
273
20.5
pte630450
Paramecium tetraurelia
8.7e-10
67.8
284
22.5
Pp3c26_950
Physcomitrella patens
2.5e-09
66.2
324
23.5
Pp3c26_860
Physcomitrella patens
2.5e-09
66.2
324
23.1
pte240760
Paramecium tetraurelia
2.5e-09
66.2
289
24.9
gsu35690
Galdieria sulphuraria
4.3e-09
65.5
223
24.7
WBGene00009301
Caenorhabditis elegans
5.7e-09
65.1
146
27.4
Pp3c23_21020
Physcomitrella patens
5.7e-09
65.1
266
24.1
AT4G02630
Arabidopsis thaliana
1.3e-08
63.9
278
23.7
Pp3c26_1050
Physcomitrella patens
1.3e-08
63.9
249
24.9
pte747140
Paramecium tetraurelia
1.3e-08
63.9
263
22.8
pte543650
Paramecium tetraurelia
1.6e-08
63.5
209
25.8
emh150080
Emiliania huxleyi
2.1e-08
63.2
212
24.1
pte710480
Paramecium tetraurelia
2.1e-08
63.2
211
24.2
Pp3c22_1220
Physcomitrella patens
2.8e-08
62.8
220
24.5
pte547840
Paramecium tetraurelia
2.8e-08
62.8
258
25.2
fso115570
Fistulifera solaris
3.7e-08
62.4
275
19.3
Pp3c19_4760
Physcomitrella patens
3.7e-08
62.4
218
25.2
ENSG00000156970
Homo sapiens
4.8e-08
62.0
293
20.5
Pp3c4_140
Physcomitrella patens
8.2e-08
61.2
253
24.5
Cre09.g388689
Chlamydomonas reinhardtii
1.1e-07
60.8
258
24.0
ccr137400
Chondrus crispus
1.4e-07
60.5
152
28.3
pte437980
Paramecium tetraurelia
1.4e-07
60.5
221
23.5
pte440740
Paramecium tetraurelia
1.4e-07
60.5
275
25.5
pte573570
Paramecium tetraurelia
1.4e-07
60.5
223
23.8
pte774480
Paramecium tetraurelia
2.4e-07
59.7
368
21.5
Pp3c23_14220
Physcomitrella patens
3.1e-07
59.3
245
20.0
ccr182120
Chondrus crispus
4.1e-07
58.9
258
25.2
pte675270
Paramecium tetraurelia
5.3e-07
58.5
212
25.9
AT5G05160
Arabidopsis thaliana
6.9e-07
58.2
245
21.2
fso141410
Fistulifera solaris
6.9e-07
58.2
228
23.2
pte657340
Paramecium tetraurelia
6.9e-07
58.2
218
23.9
gene6237
Fragilariopsis cylindrus
9.0e-07
57.8
151
25.2
Pp3c16_17510
Physcomitrella patens
9.0e-07
57.8
260
23.5
Pp3c20_5180
Physcomitrella patens
9.0e-07
57.8
266
22.2
pte647600
Paramecium tetraurelia
9.0e-07
57.8
236
23.7
pte778430
Paramecium tetraurelia
9.0e-07
57.8
238
19.7
ENSG00000185974
Homo sapiens
1.2e-06
57.4
203
24.6
pte112900
Paramecium tetraurelia
1.2e-06
57.4
213
23.0
pte595460
Paramecium tetraurelia
1.2e-06
57.4
257
23.3
ccr66780
Chondrus crispus
1.5e-06
57.0
218
23.4
Cre01.g034900
Chlamydomonas reinhardtii
2.0e-06
56.6
210
23.3
pte80600
Paramecium tetraurelia
2.0e-06
56.6
172
27.3
ccr66720
Chondrus crispus
2.6e-06
56.2
205
24.9
CC00G69840
Cyclotella cryptica
2.6e-06
56.2
233
24.5
ps00G115430
Pseudo-nitzschia multiseries
2.6e-06
56.2
151
23.8
ccr122940
Chondrus crispus
3.4e-06
55.8
137
29.9
fso10600
Fistulifera solaris
3.4e-06
55.8
222
25.7
pte193430
Paramecium tetraurelia
3.4e-06
55.8
208
22.6
pte474350
Paramecium tetraurelia
3.4e-06
55.8
213
23.0
pte618440
Paramecium tetraurelia
3.4e-06
55.8
207
20.3
Pp3c19_4590
Physcomitrella patens
4.5e-06
55.5
268
20.1
AT1G68690
Arabidopsis thaliana
5.9e-06
55.1
229
23.1
Cre09.g395695
Chlamydomonas reinhardtii
5.9e-06
55.1
244
23.8
pte696670
Paramecium tetraurelia
5.9e-06
55.1
232
22.8
pte776210
Paramecium tetraurelia
5.9e-06
55.1
139
29.5
AA0053G00200
Aureococcus anophagefferens
7.6e-06
54.7
190
24.7
AT1G25390
Arabidopsis thaliana
7.6e-06
54.7
236
22.0
Pp3c13_960
Physcomitrella patens
7.6e-06
54.7
174
26.4
pte721160
Paramecium tetraurelia
7.6e-06
54.7
234
22.6
pte770350
Paramecium tetraurelia
7.6e-06
54.7
225
24.4
YGR052W
Saccharomyces cerevisiae strain S288C
7.6e-06
54.7
236
25.8
AT1G18390
Arabidopsis thaliana
1.0e-05
54.3
215
23.7
pte168230
Paramecium tetraurelia
1.0e-05
54.3
218
21.1
pte743900
Paramecium tetraurelia
1.0e-05
54.3
240
22.5
pte765390
Paramecium tetraurelia
1.0e-05
54.3
233
22.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (5 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (29 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (13 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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