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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro99_g050950
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro99_g050950
Seminavis robusta
8.7e-173
607.8
367
100.0
Sro968_g226070
Seminavis robusta
5.1e-157
555.4
273
90.5
ptri130290
Phaeodactylum tricornutum
1.5e-145
517.3
271
83.8
gene16313
Fragilariopsis cylindrus
5.3e-138
492.3
275
79.3
fso77080
Fistulifera solaris
1.9e-135
483.8
272
76.1
ps00G33510
Pseudo-nitzschia multiseries
1.9e-135
483.8
279
78.1
fso191720
Fistulifera solaris
1.8e-133
477.2
274
78.1
fso77050
Fistulifera solaris
3.0e-133
476.5
274
78.1
sya00G161050
Synedra acus
3.0e-133
476.5
261
77.4
fso160310
Fistulifera solaris
5.3e-130
465.7
272
74.3
tps130000
Thalassiosira pseudonana
2.0e-108
394.0
242
71.5
tho217020
Thalassiosira oceanica
5.0e-96
352.8
243
61.3
tps142420
Thalassiosira pseudonana
1.4e-82
308.1
240
54.2
tps193950
Thalassiosira pseudonana
7.1e-82
305.8
240
54.2
fso199510
Fistulifera solaris
7.3e-79
295.8
289
45.0
sya00G196410
Synedra acus
1.6e-78
294.7
293
46.4
ptri69840
Phaeodactylum tricornutum
6.2e-78
292.7
292
44.2
fso73640
Fistulifera solaris
3.1e-77
290.4
289
44.3
ptri72160
Phaeodactylum tricornutum
4.0e-77
290.0
276
46.4
Sro70_g039030
Seminavis robusta
1.2e-76
288.5
276
45.3
ps00G65070
Pseudo-nitzschia multiseries
1.5e-76
288.1
285
45.6
CC00G149660
Cyclotella cryptica
4.4e-76
286.6
311
42.8
gene18213
Fragilariopsis cylindrus
1.4e-74
281.6
279
43.7
fso43770
Fistulifera solaris
1.9e-74
281.2
280
45.0
fso64760
Fistulifera solaris
1.9e-74
281.2
280
45.0
Sro695_g188680
Seminavis robusta
2.1e-70
267.7
254
46.9
CC00G122160
Cyclotella cryptica
4.8e-70
266.5
221
51.6
CC00G69060
Cyclotella cryptica
3.6e-62
240.4
149
66.4
sya00G00440
Synedra acus
1.9e-55
218.0
168
52.4
ENSG00000163743
Homo sapiens
1.2e-49
198.7
226
39.4
FBgn0031816
Drosophila melanogaster
1.3e-48
195.3
239
38.1
CM13G01410
Cyanidioschyzon merolae
8.2e-46
186.0
250
37.6
ccr65580
Chondrus crispus
5.5e-42
173.3
250
35.2
Naga_100090g9
Nannochloropsis gaditana
2.1e-41
171.4
262
35.1
Cre05.g248550
Chlamydomonas reinhardtii
3.5e-41
170.6
249
35.3
Sro9_g007140
Seminavis robusta
1.0e-40
169.1
141
48.9
sya00G162130
Synedra acus
3.0e-40
167.5
253
36.8
AT1G74770
Arabidopsis thaliana
6.7e-40
166.4
242
35.5
fso155640
Fistulifera solaris
1.9e-39
164.9
251
35.1
AT3G18290
Arabidopsis thaliana
5.7e-39
163.3
245
35.9
tho328140
Thalassiosira oceanica
9.7e-39
162.5
271
34.7
Cre17.g718300
Chlamydomonas reinhardtii
2.8e-38
161.0
245
35.1
ccr36960
Chondrus crispus
6.3e-38
159.8
270
33.3
AT3G62970
Arabidopsis thaliana
2.4e-37
157.9
243
32.9
CC00G86210
Cyclotella cryptica
6.9e-37
156.4
251
33.5
SPAC2F3.16
Schizosaccharomyces pombe
6.9e-37
156.4
245
32.2
Pp3c11_6970
Physcomitrella patens
1.7e-35
151.8
259
32.8
AT1G18910
Arabidopsis thaliana
2.9e-35
151.0
240
32.9
Pp3c14_5600
Physcomitrella patens
5.0e-35
150.2
244
31.6
Pp3c10_4820
Physcomitrella patens
6.5e-35
149.8
244
32.0
tps146910
Thalassiosira pseudonana
8.5e-35
149.4
213
35.7
AT5G22920
Arabidopsis thaliana
4.2e-34
147.1
249
30.9
Ec-26_004520
Ectocarpus siliculosus
7.2e-34
146.4
265
30.2
ccr161060
Chondrus crispus
3.6e-33
144.1
248
32.3
AT5G18650
Arabidopsis thaliana
5.1e-32
140.2
244
29.5
fso150310
Fistulifera solaris
2.0e-31
138.3
189
36.0
gsu76240
Galdieria sulphuraria
2.5e-31
137.9
249
30.9
Pp3c2_31820
Physcomitrella patens
4.3e-31
137.1
274
31.4
ps00G05920
Pseudo-nitzschia multiseries
1.7e-30
135.2
250
29.6
Pp3c1_6070
Physcomitrella patens
6.3e-30
133.3
245
30.6
Pp3c6_1960
Physcomitrella patens
1.4e-29
132.1
245
29.0
Pp3c25_14501
Physcomitrella patens
1.8e-29
131.7
245
29.8
Pp3c25_14500
Physcomitrella patens
1.8e-29
131.7
245
29.8
pte243060
Paramecium tetraurelia
9.1e-29
129.4
247
30.4
AT5G25560
Arabidopsis thaliana
1.2e-28
129.0
210
32.4
tho87860
Thalassiosira oceanica
1.1e-26
122.5
210
32.4
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
2.3e-24
114.8
66
72.7
pte443830
Paramecium tetraurelia
2.0e-23
111.7
256
27.3
pte760660
Paramecium tetraurelia
9.1e-21
102.8
258
26.4
gene11141
Fragilariopsis cylindrus
1.0e-19
99.4
196
27.0
Sro345_g122370
Seminavis robusta
5.5e-10
67.0
105
32.4
Sro9_g007130
Seminavis robusta
1.7e-06
55.5
27
70.4
SPBC17D11.02c
Schizosaccharomyces pombe
4.8e-06
53.9
85
32.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (7 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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