Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro968_g226070
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro968_g226070
Seminavis robusta
1.2e-195
683.7
365
100.0
ptri130290
Phaeodactylum tricornutum
1.6e-158
560.5
295
83.7
Sro99_g050950
Seminavis robusta
6.7e-157
555.1
273
90.5
fso77080
Fistulifera solaris
6.2e-147
521.9
292
77.4
sya00G161050
Synedra acus
4.9e-144
512.3
287
78.0
fso77050
Fistulifera solaris
5.5e-143
508.8
310
75.8
fso191720
Fistulifera solaris
1.6e-142
507.3
317
74.1
gene16313
Fragilariopsis cylindrus
4.6e-142
505.8
288
78.8
fso160310
Fistulifera solaris
1.8e-141
503.8
292
75.3
ps00G33510
Pseudo-nitzschia multiseries
7.2e-135
481.9
292
75.3
tps130000
Thalassiosira pseudonana
2.8e-107
390.2
242
71.5
tho217020
Thalassiosira oceanica
3.1e-98
360.1
318
52.8
tps142420
Thalassiosira pseudonana
3.2e-82
307.0
240
54.6
tps193950
Thalassiosira pseudonana
5.4e-82
306.2
240
55.0
ptri72160
Phaeodactylum tricornutum
1.3e-80
301.6
356
41.9
sya00G196410
Synedra acus
2.5e-79
297.4
280
47.9
Sro70_g039030
Seminavis robusta
1.2e-78
295.0
278
45.7
fso199510
Fistulifera solaris
2.8e-78
293.9
301
43.9
ps00G65070
Pseudo-nitzschia multiseries
6.2e-78
292.7
287
46.0
ptri69840
Phaeodactylum tricornutum
2.3e-77
290.8
291
43.6
fso73640
Fistulifera solaris
1.2e-76
288.5
301
43.2
fso43770
Fistulifera solaris
1.5e-76
288.1
371
39.9
fso64760
Fistulifera solaris
1.5e-76
288.1
282
46.5
CC00G149660
Cyclotella cryptica
4.4e-76
286.6
307
43.3
gene18213
Fragilariopsis cylindrus
5.8e-76
286.2
302
43.0
CC00G122160
Cyclotella cryptica
5.4e-74
279.6
305
45.9
Sro695_g188680
Seminavis robusta
3.4e-68
260.4
256
45.7
CC00G69060
Cyclotella cryptica
1.1e-61
238.8
149
67.1
sya00G00440
Synedra acus
2.8e-54
214.2
170
52.4
ENSG00000163743
Homo sapiens
7.1e-50
199.5
226
38.5
FBgn0031816
Drosophila melanogaster
4.6e-49
196.8
242
37.6
CM13G01410
Cyanidioschyzon merolae
7.3e-47
189.5
259
37.1
Naga_100090g9
Nannochloropsis gaditana
4.2e-42
173.7
261
34.9
Cre05.g248550
Chlamydomonas reinhardtii
5.4e-42
173.3
249
34.9
ccr65580
Chondrus crispus
4.6e-41
170.2
250
35.6
Sro9_g007140
Seminavis robusta
1.3e-40
168.7
141
48.9
sya00G162130
Synedra acus
1.8e-40
168.3
253
36.0
AT1G74770
Arabidopsis thaliana
3.0e-40
167.5
242
35.5
AT3G18290
Arabidopsis thaliana
5.1e-40
166.8
245
36.3
fso155640
Fistulifera solaris
8.7e-40
166.0
251
35.5
AT3G62970
Arabidopsis thaliana
9.6e-39
162.5
243
33.3
Cre17.g718300
Chlamydomonas reinhardtii
1.3e-38
162.2
245
35.1
ccr36960
Chondrus crispus
6.2e-38
159.8
334
30.8
tho328140
Thalassiosira oceanica
2.4e-37
157.9
298
33.2
SPAC2F3.16
Schizosaccharomyces pombe
5.3e-37
156.8
245
31.4
CC00G86210
Cyclotella cryptica
6.9e-37
156.4
251
32.7
Pp3c11_6970
Physcomitrella patens
4.5e-36
153.7
249
33.3
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
5.8e-36
153.3
102
68.6
AT1G18910
Arabidopsis thaliana
1.7e-35
151.8
304
30.6
ccr161060
Chondrus crispus
3.8e-35
150.6
322
29.8
Pp3c14_5600
Physcomitrella patens
3.8e-35
150.6
244
31.6
Pp3c10_4820
Physcomitrella patens
3.8e-35
150.6
244
31.6
AT5G22920
Arabidopsis thaliana
5.5e-34
146.7
255
30.2
tps146910
Thalassiosira pseudonana
7.1e-34
146.4
213
34.7
Ec-26_004520
Ectocarpus siliculosus
9.3e-34
146.0
265
29.4
Pp3c2_31820
Physcomitrella patens
3.5e-33
144.1
260
32.3
gsu76240
Galdieria sulphuraria
2.3e-32
141.4
265
30.9
AT5G18650
Arabidopsis thaliana
3.9e-32
140.6
244
28.7
fso150310
Fistulifera solaris
1.9e-31
138.3
189
36.5
ps00G05920
Pseudo-nitzschia multiseries
2.5e-31
137.9
269
28.6
Pp3c25_14501
Physcomitrella patens
4.3e-31
137.1
246
30.5
Pp3c25_14500
Physcomitrella patens
4.3e-31
137.1
246
30.5
Pp3c6_1960
Physcomitrella patens
4.3e-31
137.1
246
29.7
Pp3c1_6070
Physcomitrella patens
1.3e-30
135.6
245
31.0
AT5G25560
Arabidopsis thaliana
2.8e-30
134.4
210
32.9
pte243060
Paramecium tetraurelia
2.4e-29
131.3
247
29.6
tho87860
Thalassiosira oceanica
8.4e-27
122.9
210
31.0
pte443830
Paramecium tetraurelia
1.8e-24
115.2
256
27.3
pte760660
Paramecium tetraurelia
5.3e-21
103.6
256
25.4
gene11141
Fragilariopsis cylindrus
3.8e-19
97.4
196
26.5
ccr27680
Chondrus crispus
2.1e-17
91.7
207
29.0
Sro345_g122370
Seminavis robusta
4.2e-10
67.4
105
30.5
Sro9_g007130
Seminavis robusta
2.0e-07
58.5
27
74.1
CC00G85450
Cyclotella cryptica
1.3e-06
55.8
58
46.6
SPBC17D11.02c
Schizosaccharomyces pombe
3.7e-06
54.3
92
31.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (7 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing