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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro750_g197030
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro750_g197030
Seminavis robusta
0.0e+00
2128.2
1115
100.0
ptri228950
Phaeodactylum tricornutum
2.5e-308
1059.7
1139
52.2
PSNMU-V1.4_AUG-EV-PASAV3_0081460
Pseudo-nitzschia multistriata
1.5e-289
997.3
1185
49.5
ps00G192280
Pseudo-nitzschia multiseries
3.3e-284
979.5
1171
50.0
fso136470
Fistulifera solaris
1.8e-282
973.8
1117
48.3
fso33200
Fistulifera solaris
2.6e-281
969.9
1119
48.3
sya00G32010
Synedra acus
4.0e-245
849.7
1179
44.4
gene16973
Fragilariopsis cylindrus
1.1e-226
788.5
781
55.8
tps04010
Thalassiosira pseudonana
2.5e-199
697.6
1347
37.5
CC00G99480
Cyclotella cryptica
1.8e-181
638.3
1404
35.3
Ec-20_004140
Ectocarpus siliculosus
3.7e-41
172.2
615
26.3
tho344440
Thalassiosira oceanica
1.8e-40
169.9
279
38.4
ENSG00000160695
Homo sapiens
2.9e-30
136.0
551
25.8
ENSG00000280616
Homo sapiens
2.9e-30
136.0
551
25.8
AT2G05170
Arabidopsis thaliana
7.8e-23
111.3
728
21.0
Pp3c25_5560
Physcomitrella patens
2.3e-19
99.8
573
25.5
Cre02.g095074
Chlamydomonas reinhardtii
7.0e-16
88.2
147
36.7
SPAC823.12
Schizosaccharomyces pombe
3.1e-11
72.8
248
24.6
WBGene00011067
Caenorhabditis elegans
5.2e-11
72.0
154
33.1
ccr82480
Chondrus crispus
3.7e-09
65.9
276
27.5
YMR231W
Saccharomyces cerevisiae strain S288C
7.1e-08
61.6
331
19.0
FBgn0052350
Drosophila melanogaster
2.7e-07
59.7
238
22.3
emh625840
Emiliania huxleyi
4.6e-07
58.9
234
25.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing