Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro70_g039030
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro70_g039030
Seminavis robusta
1.1e-269
930.2
507
100.0
ptri72160
Phaeodactylum tricornutum
1.5e-167
590.9
421
68.2
fso64760
Fistulifera solaris
4.3e-154
546.2
448
64.1
fso43770
Fistulifera solaris
9.6e-154
545.0
448
63.8
sya00G196410
Synedra acus
9.6e-146
518.5
344
72.7
ps00G65070
Pseudo-nitzschia multiseries
3.2e-141
503.4
354
68.9
gene18213
Fragilariopsis cylindrus
1.6e-140
501.1
345
69.6
fso199510
Fistulifera solaris
2.3e-123
444.1
441
52.4
fso73640
Fistulifera solaris
1.6e-121
438.0
449
51.2
CC00G149660
Cyclotella cryptica
2.2e-118
427.6
332
60.5
ptri69840
Phaeodactylum tricornutum
3.2e-117
423.7
316
61.7
tps193950
Thalassiosira pseudonana
5.1e-107
389.8
270
67.8
tps142420
Thalassiosira pseudonana
2.6e-103
377.5
270
64.4
CC00G122160
Cyclotella cryptica
3.8e-102
373.6
244
71.7
Sro695_g188680
Seminavis robusta
2.0e-98
361.3
299
58.9
sya00G161050
Synedra acus
5.7e-82
306.6
287
46.0
ptri130290
Phaeodactylum tricornutum
2.7e-79
297.7
381
38.1
ps00G33510
Pseudo-nitzschia multiseries
5.9e-79
296.6
278
46.0
fso77080
Fistulifera solaris
1.3e-78
295.4
386
38.1
gene16313
Fragilariopsis cylindrus
2.9e-78
294.3
283
46.3
Sro968_g226070
Seminavis robusta
3.8e-78
293.9
278
45.7
Sro99_g050950
Seminavis robusta
3.6e-76
287.3
276
45.3
tps130000
Thalassiosira pseudonana
4.7e-76
287.0
277
47.3
fso191720
Fistulifera solaris
1.4e-75
285.4
409
38.9
tho217020
Thalassiosira oceanica
2.3e-75
284.6
375
40.3
fso160310
Fistulifera solaris
1.2e-74
282.3
378
37.3
fso77050
Fistulifera solaris
1.5e-74
282.0
409
38.4
sya00G00440
Synedra acus
7.8e-63
243.0
171
60.8
Sro9_g007140
Seminavis robusta
8.1e-52
206.5
165
59.4
tho328140
Thalassiosira oceanica
3.9e-46
187.6
413
31.7
CC00G69060
Cyclotella cryptica
1.6e-39
165.6
178
41.6
FBgn0031816
Drosophila melanogaster
3.9e-38
161.0
279
32.3
ENSG00000163743
Homo sapiens
6.6e-38
160.2
257
31.9
CM13G01410
Cyanidioschyzon merolae
4.7e-36
154.1
273
36.3
Cre05.g248550
Chlamydomonas reinhardtii
2.4e-35
151.8
276
35.5
AT3G62970
Arabidopsis thaliana
1.7e-33
145.6
269
35.3
AT3G18290
Arabidopsis thaliana
3.2e-32
141.4
296
31.4
AT1G18910
Arabidopsis thaliana
5.4e-32
140.6
270
31.9
AT1G74770
Arabidopsis thaliana
1.6e-31
139.0
271
29.5
Cre17.g718300
Chlamydomonas reinhardtii
1.6e-31
139.0
272
36.4
Pp3c25_14501
Physcomitrella patens
1.0e-30
136.3
273
34.1
Pp3c25_14500
Physcomitrella patens
1.0e-30
136.3
273
34.1
Pp3c6_1960
Physcomitrella patens
1.3e-30
136.0
271
34.3
ccr65580
Chondrus crispus
3.3e-29
131.3
320
29.1
CC00G86210
Cyclotella cryptica
3.3e-29
131.3
274
29.2
ccr161060
Chondrus crispus
4.3e-29
131.0
302
30.8
SPAC2F3.16
Schizosaccharomyces pombe
7.3e-29
130.2
304
29.6
Pp3c11_6970
Physcomitrella patens
1.3e-28
129.4
270
32.6
Ec-26_004520
Ectocarpus siliculosus
2.8e-28
128.3
289
32.2
Pp3c10_4820
Physcomitrella patens
8.1e-28
126.7
273
30.8
AT5G22920
Arabidopsis thaliana
1.1e-27
126.3
283
32.2
Pp3c14_5600
Physcomitrella patens
1.1e-27
126.3
269
32.0
gsu76240
Galdieria sulphuraria
2.0e-26
122.1
278
29.9
ps00G05920
Pseudo-nitzschia multiseries
2.0e-26
122.1
278
34.5
Pp3c2_31820
Physcomitrella patens
2.6e-26
121.7
270
32.6
Naga_100090g9
Nannochloropsis gaditana
9.9e-26
119.8
287
27.5
Pp3c1_6070
Physcomitrella patens
9.9e-26
119.8
270
31.9
AT5G25560
Arabidopsis thaliana
2.1e-23
112.1
240
34.2
pte243060
Paramecium tetraurelia
2.1e-23
112.1
274
33.2
tho87860
Thalassiosira oceanica
1.5e-21
105.9
234
33.8
pte760660
Paramecium tetraurelia
5.6e-21
104.0
278
32.4
pte443830
Paramecium tetraurelia
1.3e-20
102.8
273
31.5
Sro9_g007130
Seminavis robusta
6.2e-20
100.5
52
76.9
CC00G85450
Cyclotella cryptica
2.5e-13
78.6
42
69.0
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
1.7e-09
65.9
88
36.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (6 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing