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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro702_g189930
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro702_g189930
Seminavis robusta
4.5e-197
688.3
329
100.0
fso129150
Fistulifera solaris
6.5e-127
455.3
338
65.4
gene14464
Fragilariopsis cylindrus
1.3e-122
441.0
325
64.3
gene1572
Fragilariopsis cylindrus
1.3e-122
441.0
325
64.3
fso53520
Fistulifera solaris
2.2e-122
440.3
338
63.6
ps00G174630
Pseudo-nitzschia multiseries
1.5e-120
434.1
322
64.3
ptri231850
Phaeodactylum tricornutum
1.4e-108
394.4
328
59.5
sya00G144690
Synedra acus
3.0e-108
393.3
326
57.7
CC00G140360
Cyclotella cryptica
1.8e-105
384.0
322
56.8
tps29610
Thalassiosira pseudonana
2.9e-103
376.7
300
57.0
tho150740
Thalassiosira oceanica
3.8e-87
323.2
314
49.0
gsu79930
Galdieria sulphuraria
7.7e-80
298.9
309
48.2
FBgn0024509
Drosophila melanogaster
5.6e-78
292.7
302
46.0
AA0009G02590
Aureococcus anophagefferens
2.9e-74
280.4
308
46.1
Cre17.g715750
Chlamydomonas reinhardtii
1.1e-73
278.5
300
46.7
Ec-12_007790
Ectocarpus siliculosus
1.7e-71
271.2
304
44.4
ENSG00000157020
Homo sapiens
3.4e-59
230.3
311
41.2
ccr56640
Chondrus crispus
1.1e-57
225.3
321
39.6
CM10G01140
Cyanidioschyzon merolae
3.5e-56
220.3
354
36.4
Pp3c22_20020
Physcomitrella patens
2.3e-55
217.6
301
36.9
Pp3c22_17920
Physcomitrella patens
1.9e-54
214.5
306
37.6
Pp3c19_12500
Physcomitrella patens
5.6e-54
213.0
304
36.2
Pp3c19_9370
Physcomitrella patens
7.3e-54
212.6
300
37.0
WBGene00003806
Caenorhabditis elegans
6.2e-53
209.5
306
38.2
AT2G30050
Arabidopsis thaliana
2.4e-41
171.0
301
32.6
AT3G01340
Arabidopsis thaliana
2.7e-40
167.5
308
32.8
YLR208W
Saccharomyces cerevisiae strain S288C
7.8e-40
166.0
304
30.6
SPBC215.15
Schizosaccharomyces pombe
2.3e-39
164.5
287
32.1
ENSG00000085415
Homo sapiens
1.9e-38
161.4
320
28.8
PSNMU-V1.4_AUG-EV-PASAV3_0095210
Pseudo-nitzschia multistriata
1.8e-36
154.8
95
80.0
pte445730
Paramecium tetraurelia
3.6e-29
130.6
293
28.7
Naga_101320g1
Nannochloropsis gaditana
8.1e-29
129.4
130
51.5
ptri164470
Phaeodactylum tricornutum
2.4e-28
127.9
339
28.0
tps215990
Thalassiosira pseudonana
2.4e-28
127.9
319
28.8
PSNMU-V1.4_AUG-EV-PASAV3_0121290
Pseudo-nitzschia multistriata
6.9e-28
126.3
314
27.4
ps00G134570
Pseudo-nitzschia multiseries
1.5e-27
125.2
314
27.1
FBgn0033247
Drosophila melanogaster
4.5e-27
123.6
320
27.5
SPAC15F9.02
Schizosaccharomyces pombe
5.8e-27
123.2
318
28.0
sya00G114070
Synedra acus
7.6e-27
122.9
366
26.0
pte758460
Paramecium tetraurelia
2.9e-26
120.9
292
28.1
emh224540
Emiliania huxleyi
1.4e-25
118.6
89
55.1
YGL100W
Saccharomyces cerevisiae strain S288C
2.4e-25
117.9
355
25.9
gsu58970
Galdieria sulphuraria
4.2e-25
117.1
313
30.0
fso166270
Fistulifera solaris
1.6e-24
115.2
325
28.0
pte460870
Paramecium tetraurelia
1.0e-23
112.5
297
27.3
fso62050
Fistulifera solaris
1.3e-23
112.1
327
28.1
pte420310
Paramecium tetraurelia
1.3e-23
112.1
301
28.2
Ec-07_003170
Ectocarpus siliculosus
1.1e-20
102.4
339
26.8
Pp3c5_28960
Physcomitrella patens
2.6e-19
97.8
326
24.5
Sro909_g218970
Seminavis robusta
7.6e-19
96.3
400
23.8
CC00G155200
Cyclotella cryptica
1.6e-16
88.6
357
24.4
emh352120
Emiliania huxleyi
3.5e-16
87.4
324
24.7
Cre03.g192000
Chlamydomonas reinhardtii
1.0e-15
85.9
322
24.8
AT2G32700
Arabidopsis thaliana
2.4e-12
74.7
257
25.3
Pp3c22_20100
Physcomitrella patens
1.2e-11
72.4
53
52.8
gsu137090
Galdieria sulphuraria
8.5e-10
66.2
291
24.4
WBGene00003804
Caenorhabditis elegans
5.5e-09
63.5
136
31.6
tps36080
Thalassiosira pseudonana
3.6e-08
60.8
262
24.8
tps36000
Thalassiosira pseudonana
1.3e-07
58.9
264
25.0
Sro369_g128140
Seminavis robusta
2.3e-07
58.2
242
23.6
AT2G26060
Arabidopsis thaliana
3.0e-07
57.8
91
37.4
Pp3c1_3750
Physcomitrella patens
3.9e-07
57.4
176
25.6
Pp3c1_3770
Physcomitrella patens
3.9e-07
57.4
176
25.6
pte554720
Paramecium tetraurelia
5.1e-07
57.0
165
25.5
Pp3c2_31720
Physcomitrella patens
6.7e-07
56.6
262
22.5
Pp3c1_3700
Physcomitrella patens
8.7e-07
56.2
176
25.0
Pp3c21_14500
Physcomitrella patens
1.5e-06
55.5
85
35.3
AT4G32990
Arabidopsis thaliana
3.3e-06
54.3
112
32.1
gsu30210
Galdieria sulphuraria
4.3e-06
53.9
172
26.2
gsu30230
Galdieria sulphuraria
4.3e-06
53.9
172
26.2
Naga_100623g3
Nannochloropsis gaditana
5.7e-06
53.5
74
37.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (5 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing