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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Sro6_g005140
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Sro6_g005140
Seminavis robusta
4.4e-262
905.2
516
100.0
ps00G146670
Pseudo-nitzschia multiseries
1.0e-130
468.8
547
53.0
gene4449
Fragilariopsis cylindrus
4.9e-128
459.9
367
61.3
fso117030
Fistulifera solaris
3.5e-126
453.8
369
62.3
fso72960
Fistulifera solaris
1.0e-125
452.2
368
62.0
ptri26120
Phaeodactylum tricornutum
6.6e-125
449.5
529
48.4
gene16176
Fragilariopsis cylindrus
1.2e-113
412.1
361
58.2
PSNMU-V1.4_AUG-EV-PASAV3_0044820
Pseudo-nitzschia multistriata
6.4e-112
406.4
338
59.2
sya00G39610
Synedra acus
2.0e-105
384.8
381
53.3
tps27790
Thalassiosira pseudonana
3.3e-100
367.5
469
45.2
CC00G72160
Cyclotella cryptica
5.4e-95
350.1
437
46.5
Naga_100011g51
Nannochloropsis gaditana
5.5e-55
217.2
363
39.7
Pp3c16_2890
Physcomitrella patens
1.3e-43
179.5
370
33.0
Cre04.g217922
Chlamydomonas reinhardtii
3.5e-41
171.4
361
32.1
FBgn0039875
Drosophila melanogaster
3.5e-41
171.4
351
33.9
AA0054G00050
Aureococcus anophagefferens
7.7e-41
170.2
331
36.9
ccr128240
Chondrus crispus
2.2e-40
168.7
362
32.3
AT3G16090
Arabidopsis thaliana
1.2e-38
162.9
365
31.5
ENSG00000162298
Homo sapiens
2.7e-38
161.8
368
31.2
AT1G65040
Arabidopsis thaliana
1.0e-37
159.8
359
30.9
CM07G01900
Cyanidioschyzon merolae
4.4e-36
154.5
367
31.6
gsu122750
Galdieria sulphuraria
1.7e-35
152.5
363
30.6
WBGene00004768
Caenorhabditis elegans
2.0e-33
145.6
357
30.3
gsu122730
Galdieria sulphuraria
4.2e-31
137.9
353
30.0
SPBC17D11.02c
Schizosaccharomyces pombe
7.2e-23
110.5
387
26.9
sya00G33980
Synedra acus
6.3e-19
97.4
78
64.1
emh327260
Emiliania huxleyi
5.9e-17
90.9
320
26.9
pte575230
Paramecium tetraurelia
8.0e-14
80.5
375
25.1
Ec-28_002940
Ectocarpus siliculosus
6.8e-13
77.4
121
38.0
emh103250
Emiliania huxleyi
1.2e-12
76.6
191
30.4
ENSG00000159461
Homo sapiens
8.3e-11
70.5
203
28.1
AT4G30370
Arabidopsis thaliana
6.0e-09
64.3
60
41.7
AT2G18670
Arabidopsis thaliana
2.3e-08
62.4
51
43.1
emh266500
Emiliania huxleyi
3.0e-08
62.0
80
36.2
fso106010
Fistulifera solaris
1.1e-07
60.1
47
48.9
fso135870
Fistulifera solaris
1.1e-07
60.1
47
48.9
ptri174090
Phaeodactylum tricornutum
1.1e-07
60.1
58
37.9
tho158400
Thalassiosira oceanica
1.5e-07
59.7
61
39.3
pte396040
Paramecium tetraurelia
1.9e-07
59.3
58
41.4
YOL013C
Saccharomyces cerevisiae strain S288C
1.9e-07
59.3
413
21.8
Cre13.g580750
Chlamydomonas reinhardtii
3.3e-07
58.5
71
38.0
CC00G58730
Cyclotella cryptica
3.3e-07
58.5
63
36.5
sya00G186770
Synedra acus
3.3e-07
58.5
53
41.5
ptri175000
Phaeodactylum tricornutum
4.3e-07
58.2
46
47.8
Sro126_g060610
Seminavis robusta
4.3e-07
58.2
55
40.0
AT3G56580
Arabidopsis thaliana
1.2e-06
56.6
57
33.3
CC00G23610
Cyclotella cryptica
1.2e-06
56.6
73
34.2
CC00G88440
Cyclotella cryptica
1.2e-06
56.6
73
34.2
AT3G10815
Arabidopsis thaliana
1.6e-06
56.2
92
35.9
AT3G60220
Arabidopsis thaliana
1.6e-06
56.2
67
38.8
Ec-08_003750
Ectocarpus siliculosus
1.6e-06
56.2
51
35.3
Pp3c1_42450
Physcomitrella patens
1.6e-06
56.2
59
39.0
pte477940
Paramecium tetraurelia
1.6e-06
56.2
51
39.2
ENSG00000198919
Homo sapiens
2.1e-06
55.8
42
50.0
AT2G40830
Arabidopsis thaliana
2.8e-06
55.5
57
31.6
AT3G20395
Arabidopsis thaliana
2.8e-06
55.5
47
46.8
WBGene00019185
Caenorhabditis elegans
2.8e-06
55.5
110
30.9
gsu76720
Galdieria sulphuraria
2.8e-06
55.5
49
36.7
ENSG00000133135
Homo sapiens
2.8e-06
55.5
116
30.2
Ec-07_004640
Ectocarpus siliculosus
3.6e-06
55.1
108
35.2
ENSG00000070423
Homo sapiens
3.6e-06
55.1
58
34.5
Pp3c13_9770
Physcomitrella patens
3.6e-06
55.1
226
23.5
pte543470
Paramecium tetraurelia
3.6e-06
55.1
47
46.8
sya00G122820
Synedra acus
3.6e-06
55.1
55
38.2
AT2G42350
Arabidopsis thaliana
4.7e-06
54.7
49
42.9
FBgn0052850
Drosophila melanogaster
4.7e-06
54.7
58
32.8
pte644360
Paramecium tetraurelia
4.7e-06
54.7
47
46.8
emh563860
Emiliania huxleyi
6.2e-06
54.3
81
35.8
pte265900
Paramecium tetraurelia
6.2e-06
54.3
60
35.0
pte505110
Paramecium tetraurelia
6.2e-06
54.3
368
23.1
AT4G28890
Arabidopsis thaliana
8.0e-06
53.9
92
30.4
fso188970
Fistulifera solaris
8.0e-06
53.9
79
31.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (11 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (2 genes)
Synedra acus (4 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing